Difference between revisions of "1.6.5.4-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** succinic semialdehyde dehydrogenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.79 EC-1.2.1.79]
+
** [http://enzyme.expasy.org/EC/1.6.5.4 EC-1.6.5.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[SUC]][c] '''+''' 2 [[PROTON]][c]
+
** 2 [[CPD-318]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[ASCORBATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate semialdehyde[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c] '''=>''' 1 NADPH[c] '''+''' 1 succinate[c] '''+''' 2 H+[c]
+
** 2 monodehydroascorbate radical[c] '''+''' 1 NADH[c] '''=>''' 1 H+[c] '''+''' 1 NAD+[c] '''+''' 2 L-ascorbate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008575001]]
+
* Gene: [[CHC_T00006866001_1]]
−
** ORIGINAL_GENOME
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** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
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** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00004739001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
+
* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
+
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
+
−
** '''2''' reactions found over '''11''' reactions in the full pathway
+
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
+
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
−
* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
+
−
** '''1''' reactions found over '''17''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[original_genome]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13213 13213]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14581 14581]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
+
** [http://www.uniprot.org/uniprot/Q9S926 Q9S926]
−
** [http://www.uniprot.org/uniprot/P25526 P25526]
+
** [http://www.uniprot.org/uniprot/Q40977 Q40977]
−
** [http://www.uniprot.org/uniprot/O85997 O85997]
+
** [http://www.uniprot.org/uniprot/Q42711 Q42711]
 +
** [http://www.uniprot.org/uniprot/Q43497 Q43497]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00095 R00095]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=succinic semialdehyde dehydrogenase}}
+
{{#set: ec number=EC-1.6.5.4}}
−
{{#set: ec number=EC-1.2.1.79}}
+
{{#set: gene associated=CHC_T00006866001_1|CHC_T00004739001_1}}
−
{{#set: gene associated=CHC_T00008575001}}
+
{{#set: in pathway=PWY-6370}}
−
{{#set: in pathway=PWY-6537|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6993|P105-PWY|P181-PWY}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 16:14, 9 January 2019

Reaction 1.6.5.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 monodehydroascorbate radical[c] + 1 NADH[c] => 1 H+[c] + 1 NAD+[c] + 2 L-ascorbate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6370, ascorbate recycling (cytosolic): PWY-6370
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




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