Difference between revisions of "IMIDPHOSDEHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMIDPHOSDEHYD-RXN IMIDPHOSDEHYD-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** succinic semialdehyde dehydrogenase
+
** imidazoleglycerol-phosphate dehydratase (IGPD)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.79 EC-1.2.1.79]
+
** [http://enzyme.expasy.org/EC/4.2.1.19 EC-4.2.1.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[SUC]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[IMIDAZOLE-ACETOL-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate semialdehyde[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c] '''=>''' 1 NADPH[c] '''+''' 1 succinate[c] '''+''' 2 H+[c]
+
** 1 D-erythro-imidazole-glycerol-phosphate[c] '''=>''' 1 H2O[c] '''+''' 1 imidazole acetol-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008575001]]
+
* Gene: [[CHC_T00008556001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
***AUTOMATED-NAME-MATCH
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** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008556001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
+
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
+
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
+
−
** '''2''' reactions found over '''11''' reactions in the full pathway
+
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
+
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
−
* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
+
−
** '''1''' reactions found over '''17''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
*** [[original_genome]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13213 13213]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11040 11040]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
+
** [http://www.uniprot.org/uniprot/Q58109 Q58109]
−
** [http://www.uniprot.org/uniprot/P25526 P25526]
+
** [http://www.uniprot.org/uniprot/P06633 P06633]
−
** [http://www.uniprot.org/uniprot/O85997 O85997]
+
** [http://www.uniprot.org/uniprot/P10368 P10368]
 +
** [http://www.uniprot.org/uniprot/P06987 P06987]
 +
** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76]
 +
** [http://www.uniprot.org/uniprot/P44327 P44327]
 +
** [http://www.uniprot.org/uniprot/Q02134 Q02134]
 +
** [http://www.uniprot.org/uniprot/P64371 P64371]
 +
** [http://www.uniprot.org/uniprot/Q12578 Q12578]
 +
** [http://www.uniprot.org/uniprot/P18787 P18787]
 +
** [http://www.uniprot.org/uniprot/P16247 P16247]
 +
** [http://www.uniprot.org/uniprot/P28624 P28624]
 +
** [http://www.uniprot.org/uniprot/P34041 P34041]
 +
** [http://www.uniprot.org/uniprot/Q02986 Q02986]
 +
** [http://www.uniprot.org/uniprot/P40374 P40374]
 +
** [http://www.uniprot.org/uniprot/P48054 P48054]
 +
** [http://www.uniprot.org/uniprot/Q43072 Q43072]
 +
** [http://www.uniprot.org/uniprot/Q9X7B9 Q9X7B9]
 +
** [http://www.uniprot.org/uniprot/O48932 O48932]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03457 R03457]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=succinic semialdehyde dehydrogenase}}
+
{{#set: common name=imidazoleglycerol-phosphate dehydratase (IGPD)}}
−
{{#set: ec number=EC-1.2.1.79}}
+
{{#set: ec number=EC-4.2.1.19}}
−
{{#set: gene associated=CHC_T00008575001}}
+
{{#set: gene associated=CHC_T00008556001_1|CHC_T00008556001}}
−
{{#set: in pathway=PWY-6537|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6993|P105-PWY|P181-PWY}}
+
{{#set: in pathway=HISTSYN-PWY}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
−
{{#set: reconstruction source=original_genome}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:15, 9 January 2019

Reaction IMIDPHOSDEHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • imidazoleglycerol-phosphate dehydratase (IGPD)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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