Difference between revisions of "F16BDEPHOS-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Glycogens Glycogens] == * common name: ** a glycogen * Synonym(s): ** 6-α-D-(1,4-α-...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Glycogens Glycogens] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16BDEPHOS-RXN F16BDEPHOS-RXN] ==
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* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a glycogen
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** fructose-1,6-bisphosphatase
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** fructose-1,6-bisphosphatase precursor
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.11 EC-3.1.3.11]
 
* Synonym(s):
 
* Synonym(s):
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** 6-α-D-(1,4-α-D-glucano)-glucan
 
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** glycogen
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-4301]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]
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* [[RXN-7669]]
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* With common name(s):
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* [[GLYCOGEN-BRANCH-RXN]]
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** 1 fructose 1,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 phosphate[c]
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== Reaction(s) of unknown directionality ==
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* [[GLYMALTOPHOSPHORYL-RXN]]
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== Genes associated with this reaction  ==
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* [[GLYCOPHOSPHORYL-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008570001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008369001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00002260001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008570001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008537001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008537001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
 +
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
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** '''11''' reactions found over '''11''' reactions in the full pathway
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* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a glycogen}}
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* RHEA:
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{{#set: common name=6-α-D-(1,4-α-D-glucano)-glucan|glycogen}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11064 11064]
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{{#set: consumed by=RXN-4301}}
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* UNIPROT:
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{{#set: produced by=RXN-7669|GLYCOGEN-BRANCH-RXN}}
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** [http://www.uniprot.org/uniprot/P09199 P09199]
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{{#set: consumed or produced by=GLYMALTOPHOSPHORYL-RXN|GLYCOPHOSPHORYL-RXN}}
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** [http://www.uniprot.org/uniprot/P19112 P19112]
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** [http://www.uniprot.org/uniprot/P22780 P22780]
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** [http://www.uniprot.org/uniprot/P09467 P09467]
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** [http://www.uniprot.org/uniprot/Q9JUL6 Q9JUL6]
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** [http://www.uniprot.org/uniprot/Q9CIU9 Q9CIU9]
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** [http://www.uniprot.org/uniprot/P09202 P09202]
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** [http://www.uniprot.org/uniprot/Q45597 Q45597]
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** [http://www.uniprot.org/uniprot/P45292 P45292]
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** [http://www.uniprot.org/uniprot/Q9PP83 Q9PP83]
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** [http://www.uniprot.org/uniprot/P19912 P19912]
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** [http://www.uniprot.org/uniprot/P19911 P19911]
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** [http://www.uniprot.org/uniprot/Q9HGZ4 Q9HGZ4]
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** [http://www.uniprot.org/uniprot/P09201 P09201]
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** [http://www.uniprot.org/uniprot/P0A993 P0A993]
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** [http://www.uniprot.org/uniprot/P00636 P00636]
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** [http://www.uniprot.org/uniprot/P23014 P23014]
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** [http://www.uniprot.org/uniprot/P27994 P27994]
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** [http://www.uniprot.org/uniprot/P14766 P14766]
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** [http://www.uniprot.org/uniprot/P09195 P09195]
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** [http://www.uniprot.org/uniprot/Q7M0S7 Q7M0S7]
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** [http://www.uniprot.org/uniprot/P25851 P25851]
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** [http://www.uniprot.org/uniprot/Q05079 Q05079]
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** [http://www.uniprot.org/uniprot/P46275 P46275]
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** [http://www.uniprot.org/uniprot/P46276 P46276]
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** [http://www.uniprot.org/uniprot/Q43139 Q43139]
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** [http://www.uniprot.org/uniprot/P00637 P00637]
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** [http://www.uniprot.org/uniprot/O65827 O65827]
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** [http://www.uniprot.org/uniprot/Q42796 Q42796]
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** [http://www.uniprot.org/uniprot/P46267 P46267]
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** [http://www.uniprot.org/uniprot/Q07204 Q07204]
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** [http://www.uniprot.org/uniprot/P22418 P22418]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00762 R00762]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=fructose-1,6-bisphosphatase}}
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{{#set: common name=fructose-1,6-bisphosphatase precursor}}
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{{#set: ec number=EC-3.1.3.11}}
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{{#set: gene associated=CHC_T00008570001_1|CHC_T00008369001_1|CHC_T00002260001_1|CHC_T00008570001|CHC_T00008537001|CHC_T00008537001_1}}
 +
{{#set: in pathway=P185-PWY|GLYCOLYSIS|PWY-5484|SUCSYN-PWY|CALVIN-PWY|PWY66-399|GLUCONEO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:16, 9 January 2019

Reaction F16BDEPHOS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • fructose-1,6-bisphosphatase
    • fructose-1,6-bisphosphatase precursor
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 fructose 1,6-bisphosphate[c] + 1 H2O[c] => 1 β-D-fructofuranose 6-phosphate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 11 reactions found over 11 reactions in the full pathway
  • SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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