Difference between revisions of "PWY-7398"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside-diphosphate ki...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** nucleoside-diphosphate kinase
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** coumarins biosynthesis (engineered)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''13''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[CTP]][c] '''+''' 1 [[ADP]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 ATP[c] '''+''' 1 CDP[c] '''=>''' 1 CTP[c] '''+''' 1 ADP[c]
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*** [[CHC_T00008160001_1]]
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*** [[CHC_T00008472001_1]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-arabidopsis_thaliana]]
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* [[CHC_T00009258001_1]]
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*** [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]-[[a.taliana]]
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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* [[CHC_T00009233001]]
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** 8 associated gene(s):
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** ORIGINAL_GENOME
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*** [[CHC_T00001053001_1]]
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***AUTOMATED-NAME-MATCH
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*** [[CHC_T00007618001_1]]
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* [[CHC_T00009258001]]
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*** [[CHC_T00001829001_1]]
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** ORIGINAL_GENOME
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*** [[CHC_T00004504001_1]]
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***AUTOMATED-NAME-MATCH
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*** [[CHC_T00003825001_1]]
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* [[CHC_T00009233001_1]]
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*** [[CHC_T00001696001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00009338001_1]]
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== Pathways  ==
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*** [[CHC_T00005475001_1]]
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* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
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** 2 reconstruction source(s) associated:
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[orthology-arabidopsis_thaliana]]
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== Reconstruction information  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[orthology]]:
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* [[RXN-1126]]
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** [[pantograph]]:
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** 2 associated gene(s):
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00008160001_1]]
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*** [[a.taliana]]
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*** [[CHC_T00008472001_1]]
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* [[annotation]]:
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** 2 reconstruction source(s) associated:
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** [[pathwaytools]]:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12349 RXN-12349]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12350 RXN-12350]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12963 RXN-12963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12965 RXN-12965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14987 RXN-14987]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14988 RXN-14988]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14990 RXN-14990]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16762 RXN-16762]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16763 RXN-16763]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9697 RXN-9697]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=coumarins biosynthesis (engineered)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00570 R00570]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=3}}
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{{#set: common name=nucleoside-diphosphate kinase}}
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{{#set: total reaction=13}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: completion rate=23.0}}
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{{#set: gene associated=CHC_T00009258001_1|CHC_T00009233001|CHC_T00009258001|CHC_T00009233001_1}}
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{{#set: in pathway=PWY-7205}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:17, 9 January 2019

Pathway PWY-7398

Reaction(s) found

3 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7398&oldid=20080"