Difference between revisions of "PWY-361"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHO-RIBOSYL-GLYCINEAMIDE 5-PHOSPHO-RIBOSYL-GLYCINEAMIDE] == * smiles: ** C([N+])C(=O)NC1(...")
 
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHO-RIBOSYL-GLYCINEAMIDE 5-PHOSPHO-RIBOSYL-GLYCINEAMIDE] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] ==
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* smiles:
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** C([N+])C(=O)NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)
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* inchi key:
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** InChIKey=OBQMLSFOUZUIOB-SHUUEZRQSA-M
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* common name:
 
* common name:
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** N1-(5-phospho-β-D-ribosyl)glycinamide
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** phenylpropanoid biosynthesis
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* molecular weight:
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* taxonomic range:
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** 285.17   
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
 
* Synonym(s):
 
* Synonym(s):
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** 5-phospho-β-D-ribosyl-glycineamide
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** monolignol biosynthesis
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** 5'-phosphoribosylglycinamide
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** lignin biosynthesis
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** 5'-phosphoribosylglycineamide
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** 5'-p-ribosylglycinamide
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** 5'-p-ribosylglycineamide
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** GAR
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[GARTRANSFORMYL2-RXN]]
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'''6''' reactions found over '''15''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* [[GLYRIBONUCSYN-RXN]]
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** 2 associated gene(s):
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== Reaction(s) of unknown directionality ==
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*** [[CHC_T00008160001_1]]
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* [[GART-RXN]]
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*** [[CHC_T00008472001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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** 8 associated gene(s):
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*** [[CHC_T00001053001_1]]
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*** [[CHC_T00007618001_1]]
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*** [[CHC_T00001829001_1]]
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*** [[CHC_T00004504001_1]]
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*** [[CHC_T00003825001_1]]
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*** [[CHC_T00001696001_1]]
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*** [[CHC_T00009338001_1]]
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*** [[CHC_T00005475001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-1101]]
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** 1 associated gene(s):
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*** [[CHC_T00009538001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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* [[RXN-1102]]
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** 2 associated gene(s):
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*** [[CHC_T00007340001_1]]
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*** [[CHC_T00009372001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-1106]]
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** 1 associated gene(s):
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*** [[CHC_T00009538001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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* [[RXN-1125]]
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** 2 associated gene(s):
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*** [[CHC_T00007340001_1]]
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*** [[CHC_T00009372001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.36-RXN 1.14.13.36-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.133-RXN 2.3.1.133-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1142 RXN-1142]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2581 RXN-2581]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2601 RXN-2601]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2602 RXN-2602]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2621 RXN-2621]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2622 RXN-2622]
 
== External links  ==
 
== External links  ==
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* BIGG : gar
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* ARACYC:
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* PUBCHEM:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-361 PWY-361]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657462 90657462]
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{{#set: common name=phenylpropanoid biosynthesis}}
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* HMDB : HMDB02022
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{{#set: taxonomic range=TAX-58024}}
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* LIGAND-CPD:
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{{#set: common name=monolignol biosynthesis|lignin biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03838 C03838]
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{{#set: reaction found=6}}
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* CHEBI:
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{{#set: total reaction=15}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58457 58457]
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{{#set: completion rate=40.0}}
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* METABOLIGHTS : MTBLC58457
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{{#set: smiles=C([N+])C(=O)NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)}}
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{{#set: inchi key=InChIKey=OBQMLSFOUZUIOB-SHUUEZRQSA-M}}
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{{#set: common name=N1-(5-phospho-β-D-ribosyl)glycinamide}}
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{{#set: molecular weight=285.17    }}
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{{#set: common name=5-phospho-β-D-ribosyl-glycineamide|5'-phosphoribosylglycinamide|5'-phosphoribosylglycineamide|5'-p-ribosylglycinamide|5'-p-ribosylglycineamide|GAR}}
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{{#set: consumed by=GARTRANSFORMYL2-RXN}}
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{{#set: produced by=GLYRIBONUCSYN-RXN}}
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{{#set: consumed or produced by=GART-RXN}}
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Latest revision as of 16:22, 9 January 2019

Pathway PWY-361

  • common name:
    • phenylpropanoid biosynthesis
  • taxonomic range:
  • Synonym(s):
    • monolignol biosynthesis
    • lignin biosynthesis

Reaction(s) found

6 reactions found over 15 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-361&oldid=20211"