Difference between revisions of "RXN-8991"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** L-Nδ-acetylornithine biosynthesis
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** 3-isopropylmalate dehydratase
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** 3-isopropylmalate dehydratase small subunit
 
* Synonym(s):
 
* Synonym(s):
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** L-N-delta-acetylornithine biosynthesis
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** (2R,3S)-3-isopropylmalate hydro-lyase
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** Nδ-acetyl-L-ornithine biosynthesis
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** β-isopropylmalate dehydratase
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** L-N5-acetylornithine biosynthesis
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** α-isopropylmalate isomerase
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** 3-isopropylmalate hydro-lyase
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''4''' reaction(s) found
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* With identifiers:
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** [[GLUTKIN-RXN]]
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** 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-9451]][c]
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** [[ARGINASE-RXN]]
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* With common name(s):
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** [[GLUTSEMIALDEHYDROG-RXN]]
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** 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 H2O[c] '''+''' 1 2-isopropylmaleate[c]
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** [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* '''3''' reaction(s) not found
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN]
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* Gene: [[CHC_T00009087001_1]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903]
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** Source: [[orthology-galdieria.sulphuraria]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12667 RXN-12667]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00009184001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009087001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009184001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-6922
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10676 10676]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-6922 PWY-6922]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001]
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=3-isopropylmalate dehydratase}}
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{{#set: common name=L-N&delta;-acetylornithine biosynthesis}}
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{{#set: common name=3-isopropylmalate dehydratase small subunit}}
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{{#set: common name=L-N-delta-acetylornithine biosynthesis|N&delta;-acetyl-L-ornithine biosynthesis|L-N5-acetylornithine biosynthesis}}
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{{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}}
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{{#set: reaction found=4}}
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{{#set: gene associated=CHC_T00009087001_1|CHC_T00009184001|CHC_T00009087001|CHC_T00009184001_1}}
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{{#set: reaction not found=3}}
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{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:23, 9 January 2019

Reaction RXN-8991

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase
    • 3-isopropylmalate dehydratase small subunit
  • Synonym(s):
    • (2R,3S)-3-isopropylmalate hydro-lyase
    • β-isopropylmalate dehydratase
    • α-isopropylmalate isomerase
    • 3-isopropylmalate hydro-lyase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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