Difference between revisions of "RXN-16909"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17116 RXN-17116] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16909 RXN-16909] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | * | + | * common name: |
| − | ** | + | ** carbamoyl phosphate synthase small subunit |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CPD-18238]][c] '''+''' 1 [[ADP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 carboxyphosphate[c] '''+''' 1 ADP[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00010056001_1]] |
| − | ** [[ | + | ** Source: [[orthology-galdieria.sulphuraria]] |
| − | * [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| − | ** [[ | + | * Gene: [[CHC_70]] |
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[CHC_T00008596001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693] |
| − | ** '''3''' reactions found over ''' | + | ** '''3''' reactions found over '''12''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-galdieria.sulphuraria]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: | + | {{#set: common name=carbamoyl phosphate synthase small subunit}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=CHC_T00010056001_1|CHC_70|CHC_T00008596001_1}} |
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-7693}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 16:25, 9 January 2019
Contents
Reaction RXN-16909
- direction:
- LEFT-TO-RIGHT
- common name:
- carbamoyl phosphate synthase small subunit
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 ATP[c] + 1 hydrogencarbonate[c] => 1 carboxyphosphate[c] + 1 ADP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00010056001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_70
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008596001_1
- Source: orthology-galdieria.sulphuraria
Pathways
- PWY-7693, guadinomine B biosynthesis: PWY-7693
- 3 reactions found over 12 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
