Difference between revisions of "GLUC1PURIDYLTRANS-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CYS HOMO-CYS] == * smiles: ** C(C(CCS)[N+])(=O)[O-] * inchi key: ** InChIKey=FFFHZYDWPBMWH...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CYS HOMO-CYS] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PURIDYLTRANS-RXN GLUC1PURIDYLTRANS-RXN] ==
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* smiles:
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* direction:
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** C(C(CCS)[N+])(=O)[O-]
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** REVERSIBLE
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* inchi key:
+
−
** InChIKey=FFFHZYDWPBMWHY-VKHMYHEASA-N
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* common name:
 
* common name:
−
** L-homocysteine
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** UDPglucose pyrophosphorylase
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* molecular weight:
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* ec number:
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** 135.181   
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** [http://enzyme.expasy.org/EC/2.7.7.64 EC-2.7.7.64]
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** [http://enzyme.expasy.org/EC/2.7.7.9 EC-2.7.7.9]
 
* Synonym(s):
 
* Synonym(s):
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** homo-cys
 
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** homocysteine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31.]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[GLC-1-P]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[CPD-12575]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-15131]]
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* With common name(s):
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* [[CYSTATHIONINE-BETA-LYASE-RXN]]
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** 1 H+[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 UTP[c] '''<=>''' 1 UDP-&alpha;-D-glucose[c] '''+''' 1 diphosphate[c]
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== Reaction(s) of unknown directionality ==
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* [[ADENOSYLHOMOCYSTEINASE-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-9384]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[HOMOCYSMET-RXN]]
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* Gene: [[CHC_T00008779001_1]]
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* [[2.1.1.3-RXN]]
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** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009281001]]
 +
** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00002564001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009281001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
== Pathways  ==
 +
* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7343]], UDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
 +
** '''5''' reactions found over '''16''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 6027-13-0
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* RHEA:
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* CAS : 454-28-4
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19889 19889]
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* METABOLIGHTS : MTBLC58199
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q05852 Q05852]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6971015 6971015]
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** [http://www.uniprot.org/uniprot/P27897 P27897]
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* HMDB : HMDB00742
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** [http://www.uniprot.org/uniprot/Q48447 Q48447]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P47691 P47691]
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** [http://www.genome.jp/dbget-bin/www_bget?C00155 C00155]
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** [http://www.uniprot.org/uniprot/P0AAB6 P0AAB6]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9UZI7 Q9UZI7]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58199 58199]
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** [http://www.uniprot.org/uniprot/P33696 P33696]
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* BIGG : hcys__L
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** [http://www.uniprot.org/uniprot/O26731 O26731]
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{{#set: smiles=C(C(CCS)[N+])(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/O05576 O05576]
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{{#set: inchi key=InChIKey=FFFHZYDWPBMWHY-VKHMYHEASA-N}}
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** [http://www.uniprot.org/uniprot/Q58730 Q58730]
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{{#set: common name=L-homocysteine}}
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** [http://www.uniprot.org/uniprot/Q9ZLI8 Q9ZLI8]
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{{#set: molecular weight=135.181    }}
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** [http://www.uniprot.org/uniprot/Q9X364 Q9X364]
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{{#set: common name=homo-cys|homocysteine}}
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** [http://www.uniprot.org/uniprot/O25363 O25363]
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{{#set: consumed by=HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31.}}
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** [http://www.uniprot.org/uniprot/Q9PMD3 Q9PMD3]
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{{#set: produced by=RXN-15131|CYSTATHIONINE-BETA-LYASE-RXN}}
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** [http://www.uniprot.org/uniprot/P44878 P44878]
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{{#set: consumed or produced by=ADENOSYLHOMOCYSTEINASE-RXN|RXN-9384|HOMOCYSMET-RXN|2.1.1.3-RXN}}
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** [http://www.uniprot.org/uniprot/O51225 O51225]
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** [http://www.uniprot.org/uniprot/O67602 O67602]
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** [http://www.uniprot.org/uniprot/P0AEP3 P0AEP3]
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** [http://www.uniprot.org/uniprot/Q43772 Q43772]
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** [http://www.uniprot.org/uniprot/P74969 P74969]
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** [http://www.uniprot.org/uniprot/Q07130 Q07130]
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** [http://www.uniprot.org/uniprot/P32861 P32861]
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** [http://www.uniprot.org/uniprot/P19595 P19595]
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** [http://www.uniprot.org/uniprot/Q07131 Q07131]
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** [http://www.uniprot.org/uniprot/P37776 P37776]
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** [http://www.uniprot.org/uniprot/P75124 P75124]
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** [http://www.uniprot.org/uniprot/Q46768 Q46768]
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** [http://www.uniprot.org/uniprot/P78811 P78811]
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** [http://www.uniprot.org/uniprot/Q9RMC3 Q9RMC3]
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** [http://www.uniprot.org/uniprot/Q9Z5G1 Q9Z5G1]
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** [http://www.uniprot.org/uniprot/P08800 P08800]
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* PIR:
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A40650 A40650]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41382 A41382]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56146 A56146]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64250 A64250]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64970 A64970]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A75096 A75096]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D49349 D49349]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69184 D69184]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70601 D70601]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64466 E64466]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E71913 E71913]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F59102 F59102]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64600 F64600]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F81300 F81300]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64095 G64095]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G70125 G70125]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70446 H70446]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC2265 JC2265]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4785 JC4785]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4985 JC4985]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0277 JX0277]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15298 S15298]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S30007 S30007]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S31431 S31431]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S35692 S35692]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41533 S41533]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62599 S62599]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S73501 S73501]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78541 S78541]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T42521 T42521]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44841 T44841]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45453 T45453]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNDOU XNDOU]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNPOU XNPOU]
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* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00289 R00289]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=UDPglucose pyrophosphorylase}}
 +
{{#set: ec number=EC-2.7.7.64}}
 +
{{#set: ec number=EC-2.7.7.9}}
 +
{{#set: gene associated=CHC_T00008779001_1|CHC_T00009281001|CHC_T00002564001_1|CHC_T00009281001_1}}
 +
{{#set: in pathway=PWY-3801|PWY-6527|PWY-7343|PWY-7238|PWY-7817}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:26, 9 January 2019

Reaction GLUC1PURIDYLTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • UDPglucose pyrophosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 α-D-glucopyranose 1-phosphate[c] + 1 UTP[c] <=> 1 UDP-α-D-glucose[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3801, sucrose degradation II (sucrose synthase): PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6527, stachyose degradation: PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7343, UDP-glucose biosynthesis: PWY-7343
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
    • 5 reactions found over 16 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GLUC1PURIDYLTRANS-RXN&oldid=20307"