Difference between revisions of "PWY-6883"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * direction: ** REVERSIBLE * common name: ** phosphoserin...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883] ==
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* direction:
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** REVERSIBLE
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* common name:
 
* common name:
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** phosphoserine aminotransferase
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** pyruvate fermentation to butanol II (engineered)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
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** 1-butanol synthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''6''' reactions in the full pathway
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** 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 4-phospho-hydroxy-L-threonine[c]
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*** [[CHC_T00008981001_1]]
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*** [[CHC_T00009349001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00008981001]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[CHC_T00000094001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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*** [[annotation-original_genome]]
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* [[CHC_T00009221001_1]]
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*** [[orthology-arabidopsis_thaliana]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00009221001]]
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* [[BUTANAL-DEHYDROGENASE-RXN]]
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** ORIGINAL_GENOME
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** 0 associated gene:
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***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
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* [[RXN-11662]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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** 4 associated gene(s):
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== Reconstruction information  ==
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*** [[CHC_T00008882001_1]]
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* [[orthology]]:
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*** [[CHC_T00009422001_1]]
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** [[pantograph]]:
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*** [[CHC_T00008557001_1]]
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00009349001_1]]
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*** [[a.taliana]]
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** 2 reconstruction source(s) associated:
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* [[annotation]]:
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*** [[orthology-galdieria.sulphuraria]]
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** [[pathwaytools]]:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[original_genome]]
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* [[RXN-11667]]
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** 3 associated gene(s):
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*** [[CHC_T00008882001_1]]
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*** [[CHC_T00009110001_1]]
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*** [[CHC_T00009349001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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* [[RXN-12558]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-161]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=pyruvate fermentation to butanol II (engineered)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573]
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
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{{#set: common name=1-butanol synthesis}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction found=6}}
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{{#set: common name=phosphoserine aminotransferase}}
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{{#set: total reaction=6}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: completion rate=100.0}}
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{{#set: gene associated=CHC_T00000094001_1|CHC_T00009221001_1|CHC_T00009221001}}
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{{#set: in pathway=PYRIDOXSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 15:28, 9 January 2019

Pathway PWY-6883

  • common name:
    • pyruvate fermentation to butanol II (engineered)
  • taxonomic range:
  • Synonym(s):
    • 1-butanol synthesis

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6883&oldid=20349"