Difference between revisions of "RXN-14959"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14959 RXN-14959] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Lipoate synthase | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[a-2-oxoglutarate-dehydrogenase-E2-protei]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 1 a [2-oxoglutarate-dehydrogenase E2 protein] N6-octanoyl-L-lysine[c] '''+''' 2 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''=>''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 2 an unsulfurated [sulfur carrier][c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 2 L-methionine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00008509001]] |
| − | ** [[ | + | ** Source: [[annotation-original_genome]] |
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[CHC_T00008509001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-7382]], lipoate biosynthesis and incorporation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382] |
| − | ** ''' | + | ** '''4''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-galdieria.sulphuraria]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC- | + | {{#set: common name=Lipoate synthase}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-2.8.1.8}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=CHC_T00008509001|CHC_T00008509001_1}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=PWY-7382}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:34, 9 January 2019
Contents
Reaction RXN-14959
- direction:
- LEFT-TO-RIGHT
- common name:
- Lipoate synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 Reduced-2Fe-2S-Ferredoxins[c] + 1 a-2-oxoglutarate-dehydrogenase-E2-protei[c] + 2 Sulfurated-Sulfur-Acceptors[c] + 2 S-ADENOSYLMETHIONINE[c] => 2 Oxidized-2Fe-2S-Ferredoxins[c] + 1 Oxo-glutarate-dehydrogenase-lipoyl[c] + 2 Unsulfurated-Sulfur-Acceptors[c] + 2 CH33ADO[c] + 2 MET[c]
- With common name(s):
- 2 a reduced [2Fe-2S] ferredoxin[c] + 1 a [2-oxoglutarate-dehydrogenase E2 protein] N6-octanoyl-L-lysine[c] + 2 a sulfurated [sulfur carrier][c] + 2 S-adenosyl-L-methionine[c] => 2 an oxidized [2Fe-2S] ferredoxin[c] + 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] + 2 an unsulfurated [sulfur carrier][c] + 2 5'-deoxyadenosine[c] + 2 L-methionine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008509001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008509001_1
- Source: orthology-galdieria.sulphuraria
Pathways
- PWY-7382, lipoate biosynthesis and incorporation (yeast): PWY-7382
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
