Difference between revisions of "RXN-7716"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-6...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7716 RXN-7716] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
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** REVERSIBLE
 
* common name:
 
* common name:
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** β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
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** dihydrolipoamide dehydrogenase
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** lipoamide dehydrogenase
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** 2-oxoglutarate dehydrogenase, E1 component
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* ec number:
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** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[MANNPISOM-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''<=>''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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** [[PHOSMANMUT-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 NAD+[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''<=>''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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* '''1''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-15203 RXN-15203]
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== Genes associated with this reaction ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008312001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008441001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010287001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008312001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010287001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008441001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-68336}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=&beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation}}
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{{#set: common name=dihydrolipoamide dehydrogenase}}
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{{#set: reaction found=2}}
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{{#set: common name=lipoamide dehydrogenase}}
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{{#set: reaction not found=1}}
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{{#set: common name=2-oxoglutarate dehydrogenase, E1 component}}
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{{#set: ec number=EC-1.8.1.4}}
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{{#set: gene associated=CHC_T00008312001|CHC_T00008441001|CHC_T00010287001_1|CHC_T00008312001_1|CHC_T00010287001|CHC_T00008441001_1}}
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{{#set: in pathway=PWY-5084}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:35, 9 January 2019

Reaction RXN-7716

  • direction:
    • REVERSIBLE
  • common name:
    • dihydrolipoamide dehydrogenase
    • lipoamide dehydrogenase
    • 2-oxoglutarate dehydrogenase, E1 component
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5084, 2-oxoglutarate decarboxylation to succinyl-CoA: PWY-5084
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-7716&oldid=20524"