Difference between revisions of "CHC T00008359001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] ==
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== Gene CHC_T00008359001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 145155
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.1.3.2 EC-3.1.3.2]
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/3.1.3.1 EC-3.1.3.1]
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* right end position:
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** 145928
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* centisome position:
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** 88.26588   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[NAD]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NADP+[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 NAD+[c]
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== Pathways associated ==
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* [[PWY-5789]]
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== Genes associated with this reaction  ==
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* [[PWY-5744]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-4381]]
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* [[CHC_T00001956001_1]]
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* [[PWY-6679]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-6722]]
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* [[CHC_T00002031001_1]]
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* [[PWY-7388]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-5743]]
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* [[CHC_T00005741001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[NADPHOS-DEPHOS-PWY]], NAD phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=NADPHOS-DEPHOS-PWY NADPHOS-DEPHOS-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=145155}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28050 28050]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=145928}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00118 R00118]
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{{#set: centisome position=88.26588    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ACETYL-COA-CARBOXYLTRANSFER-RXN}}
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{{#set: ec number=EC-3.1.3.2}}
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{{#set: pathway associated=PWY-5789|PWY-5744|PWY-4381|PWY-6679|PWY-6722|PWY-7388|PWY-5743}}
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{{#set: ec number=EC-3.1.3.1}}
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{{#set: gene associated=CHC_T00001956001_1|CHC_T00002031001_1|CHC_T00005741001_1}}
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{{#set: in pathway=PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:36, 9 January 2019

Gene CHC_T00008359001

  • left end position:
    • 145155
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 145928
  • centisome position:
    • 88.26588
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008359001&oldid=20531"