Difference between revisions of "GERANYL-PP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12540 RXN-12540] == * direction: ** LEFT-TO-RIGHT * common name: ** Fenton reaction * Synonym(s...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12540 RXN-12540] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYL-PP GERANYL-PP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C
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* molecular weight:
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** 311.188   
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* inchi key:
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** InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K
 
* common name:
 
* common name:
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** Fenton reaction
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** geranyl diphosphate
 
* Synonym(s):
 
* Synonym(s):
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** geranyl-diphosphate
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** geranyl-pyrophosphate
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** GPP
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** geranyl-PP
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** geranyl pyrophosphate
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** ω,E-geranyl diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[FPPSYN-RXN]]
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** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[FE+2]][c] '''=>''' 1 [[FE+3]][c] '''+''' 1 [[CPD-12377]][c] '''+''' 1 [[OH]][c]
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* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 hydrogen peroxide[c] '''+''' 1 Fe2+[c] '''=>''' 1 Fe3+[c] '''+''' 1 hydroxyl radical[c] '''+''' 1 OH-[c]
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== Reaction(s) of unknown directionality ==
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* [[GPPSYN-RXN]]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6854]], ethylene biosynthesis III (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* KNAPSACK : C00000846
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{{#set: common name=Fenton reaction}}
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* BIGG : grdp
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{{#set: in pathway=DETOX1-PWY-1|PWY-6854}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00341 C00341]
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{{#set: reconstruction tool=pathwaytools}}
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* HMDB : HMDB01285
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{{#set: reconstruction source=original_genome}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.14211068.html 14211068]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58057 58057]
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* PUBCHEM:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=19379894 19379894]
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* METABOLIGHTS : MTBLC58057
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{{#set: smiles=CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C}}
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{{#set: molecular weight=311.188    }}
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{{#set: inchi key=InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K}}
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{{#set: common name=geranyl diphosphate}}
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{{#set: common name=geranyl-diphosphate|geranyl-pyrophosphate|GPP|geranyl-PP|geranyl pyrophosphate|ω,E-geranyl diphosphate}}
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{{#set: consumed by=FPPSYN-RXN|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN}}
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{{#set: reversible reaction associated=GPPSYN-RXN}}

Latest revision as of 16:37, 9 January 2019

Metabolite GERANYL-PP

  • smiles:
    • CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C
  • molecular weight:
    • 311.188
  • inchi key:
    • InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K
  • common name:
    • geranyl diphosphate
  • Synonym(s):
    • geranyl-diphosphate
    • geranyl-pyrophosphate
    • GPP
    • geranyl-PP
    • geranyl pyrophosphate
    • ω,E-geranyl diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • KNAPSACK : C00000846
  • BIGG : grdp
  • LIGAND-CPD:
  • HMDB : HMDB01285
  • CHEMSPIDER:
  • CHEBI:
  • PUBCHEM:
  • METABOLIGHTS : MTBLC58057
"CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C" cannot be used as a page name in this wiki.




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