Difference between revisions of "PWY-241"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] == * direction: ** REVERSIBL...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241] ==
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* direction:
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* common name:
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** REVERSIBLE
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** C4 photosynthetic carbon assimilation cycle, NADP-ME type
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.6.1.6 EC-2.6.1.6]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
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* Synonym(s):
 
* Synonym(s):
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** PCA cycle
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** C4 photosynthesis, NADP-ME type
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c]
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* [[MALATE-DEHYDROGENASE-NADP+-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 2-oxoglutarate[c] '''+''' 1 L-leucine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 4-methyl-2-oxopentanoate[c]
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*** [[CHC_T00008878001]]
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*** [[CHC_T00009563001]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-original_genome]]
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* [[CHC_T00003864001_1]]
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* [[MALIC-NADP-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 2 associated gene(s):
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== Pathways  ==
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*** [[CHC_T00008878001_1]]
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* [[PWY-7767]], leucine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7767 PWY-7767]
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*** [[CHC_T00009563001_1]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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*** [[orthology-arabidopsis_thaliana]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-ectocarpus_siliculosus]]
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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* [[PEPCARBOX-RXN]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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** 1 associated gene(s):
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* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
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*** [[CHC_T00008437001_1]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[orthology]]:
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*** [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]:
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* [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
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*** [[galdieria.sulphuraria]]
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** 2 associated gene(s):
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*** [[CHC_T00008789001_1]]
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*** [[CHC_T00008992001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN0-5224]]
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** 6 associated gene(s):
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*** [[CHC_T00010321001_1]]
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*** [[CHC_T00010062001_1]]
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*** [[CHC_T00002086001_1]]
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*** [[CHC_T00010311001_1]]
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*** [[CHC_T00007098001_1]]
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*** [[CHC_T00010321001]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=C4 photosynthetic carbon assimilation cycle, NADP-ME type}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18321 18321]
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{{#set: taxonomic range=TAX-3193}}
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* LIGAND-RXN:
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{{#set: common name=PCA cycle|C4 photosynthesis, NADP-ME type}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
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{{#set: reaction found=5}}
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* UNIPROT:
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{{#set: total reaction=5}}
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.6.1.6}}
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{{#set: ec number=EC-2.6.1.42}}
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{{#set: gene associated=CHC_T00003864001_1}}
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{{#set: in pathway=PWY-7767|LEU-DEG2-PWY|LEUSYN-PWY|PWY-5076}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:38, 9 January 2019

Pathway PWY-241

  • common name:
    • C4 photosynthetic carbon assimilation cycle, NADP-ME type
  • taxonomic range:
  • Synonym(s):
    • PCA cycle
    • C4 photosynthesis, NADP-ME type

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-241&oldid=20575"