Difference between revisions of "3-OXOACYL-ACP-SYNTH-BASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...") |
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** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
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* [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] | * [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] | ||
** '''5''' reactions found over '''8''' reactions in the full pathway | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-5966]], fatty acid biosynthesis initiation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-5965]], fatty acid biosynthesis initiation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388] | * [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388] | ||
** '''8''' reactions found over '''9''' reactions in the full pathway | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
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*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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{{#set: ec number=EC-2.3.1.41}} | {{#set: ec number=EC-2.3.1.41}} | ||
{{#set: gene associated=CHC_T00009465001|CHC_T00009465001_1}} | {{#set: gene associated=CHC_T00009465001|CHC_T00009465001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=FASYN-INITIAL-PWY|PWY-5966|PWY-5965|PWY-7388}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:38, 9 January 2019
Contents
Reaction 3-OXOACYL-ACP-SYNTH-BASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Beta-ketoacyl synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 MALONYL-ACP[c] + 1 ACETYL-ACP[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 Acetoacetyl-ACPs[c] + 1 ACP[c]
- With common name(s):
- 1 a malonyl-[acp][c] + 1 an acetyl-[acp][c] + 1 H+[c] => 1 CO2[c] + 1 an acetoacetyl-[acp][c] + 1 a holo-[acyl-carrier protein][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009465001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009465001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
Pathways
- FASYN-INITIAL-PWY, superpathway of fatty acid biosynthesis initiation (E. coli): FASYN-INITIAL-PWY
- 5 reactions found over 8 reactions in the full pathway
- PWY-5966, fatty acid biosynthesis initiation II: PWY-5966
- 2 reactions found over 2 reactions in the full pathway
- PWY-5965, fatty acid biosynthesis initiation III: PWY-5965
- 1 reactions found over 2 reactions in the full pathway
- PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- UNIPROT:
