Difference between revisions of "PSERPHOSPHA-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2.1...")
 
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERPHOSPHA-RXN PSERPHOSPHA-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.8 EC-1.2.1.8]
+
** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Phosphoserines]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Serines]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 betaine aldehyde[c] '''<=>''' 2 H+[c] '''+''' 1 glycine betaine[c] '''+''' 1 NADH[c]
+
** 1 H2O[c] '''+''' 1 L(or D)-O-phosphoserine[c] '''+''' 1 H+[c] '''=>''' 1 phosphate[c] '''+''' 1 serine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008575001_1]]
+
* Gene: [[CHC_T00007222001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00006166001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00005163001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3722 PWY-3722]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[a.taliana]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P17202 P17202]
+
** [http://www.uniprot.org/uniprot/Q58989 Q58989]
−
** [http://www.uniprot.org/uniprot/P17445 P17445]
+
** [http://www.uniprot.org/uniprot/O25367 O25367]
−
** [http://www.uniprot.org/uniprot/P28237 P28237]
+
** [http://www.uniprot.org/uniprot/Q9JUR1 Q9JUR1]
−
** [http://www.uniprot.org/uniprot/P42757 P42757]
+
** [http://www.uniprot.org/uniprot/Q9CHW3 Q9CHW3]
−
** [http://www.uniprot.org/uniprot/Q40024 Q40024]
+
** [http://www.uniprot.org/uniprot/Q9PIL4 Q9PIL4]
−
** [http://www.uniprot.org/uniprot/O24174 O24174]
+
** [http://www.uniprot.org/uniprot/P44997 P44997]
−
** [http://www.uniprot.org/uniprot/Q43828 Q43828]
+
** [http://www.uniprot.org/uniprot/P0AGB0 P0AGB0]
−
** [http://www.uniprot.org/uniprot/Q43829 Q43829]
+
** [http://www.uniprot.org/uniprot/P42941 P42941]
−
** [http://www.uniprot.org/uniprot/O22477 O22477]
+
** [http://www.uniprot.org/uniprot/Q49823 Q49823]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/O82796 O82796]
−
{{#set: ec number=EC-1.2.1.8}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=CHC_T00008575001_1}}
+
{{#set: ec number=EC-3.1.3.3}}
−
{{#set: in pathway=PWY1F-353|BETSYN-PWY|PWY-3722|CHOLINE-BETAINE-ANA-PWY|PWY-7494}}
+
{{#set: gene associated=CHC_T00007222001_1|CHC_T00006166001_1|CHC_T00005163001_1}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=a.taliana}}
 

Latest revision as of 15:39, 9 January 2019

Reaction PSERPHOSPHA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L(or D)-O-phosphoserine[c] + 1 H+[c] => 1 phosphate[c] + 1 serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PSERPHOSPHA-RXN&oldid=20615"