Difference between revisions of "PWY-5392"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] ==
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* taxonomic range:
+
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** octane oxidation
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** reductive TCA cycle II
 +
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
 
* Synonym(s):
 
* Synonym(s):
 +
** reductive tricarboxylic acid cycle
 +
** reductive tricarboxylic acid pathway
 +
** reductive citric acid cycle
 +
** reverse citric acid cycle
 +
** carbon fixation
 +
** CO2 fixation
 +
** reductive carboxylic acid cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''3''' reaction(s) found
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'''6''' reactions found over '''12''' reactions in the full pathway
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** [[R222-RXN]]
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* [[ACONITATEDEHYDR-RXN]]
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** [[R223-RXN]]
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** 3 associated gene(s):
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** [[ALKANE-1-MONOOXYGENASE-RXN]]
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*** [[CHC_T00009087001_1]]
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*** [[CHC_T00008781001_1]]
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*** [[CHC_T00008781001]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[ACONITATEHYDR-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00009087001_1]]
 +
*** [[CHC_T00008781001]]
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*** [[CHC_T00008781001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
 +
*** [[CHC_T00008951001_1]]
 +
*** [[CHC_T00008951001]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[MALATE-DEH-RXN]]
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** 6 associated gene(s):
 +
*** [[CHC_T00009292001_1]]
 +
*** [[CHC_T00008733001_1]]
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*** [[CHC_T00008600001_1]]
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*** [[CHC_T00008733001]]
 +
*** [[CHC_T00009350001_1]]
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*** [[CHC_T00009173001_1]]
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** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PYRUFLAVREDUCT-RXN]]
 +
** 9 associated gene(s):
 +
*** [[CHC_T00008442001_1]]
 +
*** [[CHC_T00003376001_1]]
 +
*** [[CHC_T00001730001_1]]
 +
*** [[CHC_T00001454001_1]]
 +
*** [[CHC_T00003402001_1]]
 +
*** [[CHC_T00000866001_1]]
 +
*** [[CHC_T00009061001_1]]
 +
*** [[CHC_T00008758001_1]]
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*** [[CHC_T00000865001_1]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
 +
*** [[CHC_T00009212001_1]]
 +
*** [[CHC_T00008602001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''2''' reaction(s) not found
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
−
** [http://metacyc.org/META/NEW-IMAGE?object=R221-RXN R221-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRATE--COA-LIGASE-RXN CITRATE--COA-LIGASE-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=RUBREDOXIN--NAD+-REDUCTASE-RXN RUBREDOXIN--NAD+-REDUCTASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R23-RXN R23-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7929 RXN-7929]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8457 RXN-8457]
 
== External links  ==
 
== External links  ==
−
* UM-BBD-PWY : oct
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{{#set: common name=reductive TCA cycle II}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: taxonomic range=TAX-200783}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
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{{#set: common name=octane oxidation}}
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{{#set: reaction found=6}}
−
{{#set: reaction found=3}}
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{{#set: total reaction=12}}
−
{{#set: reaction not found=2}}
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{{#set: completion rate=50.0}}

Latest revision as of 15:40, 9 January 2019

Pathway PWY-5392

  • common name:
    • reductive TCA cycle II
  • taxonomic range:
  • Synonym(s):
    • reductive tricarboxylic acid cycle
    • reductive tricarboxylic acid pathway
    • reductive citric acid cycle
    • reverse citric acid cycle
    • carbon fixation
    • CO2 fixation
    • reductive carboxylic acid cycle

Reaction(s) found

6 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5392&oldid=20634"