Difference between revisions of "HISTCYCLOHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2144 RXN0-2144] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2144 RXN0-2144] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[Trans-D3-cis-D5-dodecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R,5Z)-3-hydroxy-dodec-5-enoyl-[acp][c] '''=>''' 1 a (3E,5Z)-dodeca-3,5-dienoyl-[acp][c] '''+''' 1 H2O[c]
+
** 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 1 H2O[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00008128001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
+
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44434 P44434]
 +
** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
 +
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 +
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 +
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 +
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 +
** [http://www.uniprot.org/uniprot/Q58825 Q58825]
 +
** [http://www.uniprot.org/uniprot/O28329 O28329]
 +
** [http://www.uniprot.org/uniprot/O34912 O34912]
 +
** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
 +
** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
 +
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 +
** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
 +
** [http://www.uniprot.org/uniprot/O67780 O67780]
 +
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 +
** [http://www.uniprot.org/uniprot/Q50837 Q50837]
 +
** [http://www.uniprot.org/uniprot/Q53158 Q53158]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/O59667 O59667]
 +
** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
 +
** [http://www.uniprot.org/uniprot/O82768 O82768]
 +
** [http://www.uniprot.org/uniprot/P10367 P10367]
 +
** [http://www.uniprot.org/uniprot/P06989 P06989]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.2.1.59}}
+
{{#set: ec number=EC-3.5.4.19}}
−
{{#set: in pathway=PWY0-862}}
+
{{#set: gene associated=CHC_T00008128001_1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=HISTSYN-PWY}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:42, 9 January 2019

Reaction HISTCYCLOHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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