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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5175 PWY-5175] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Cysteinyl-tRNA Synthetase | + | ** lactucaxanthin biosynthesis |
| − | * ec number: | + | * taxonomic range: |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.16 EC-6.1.1.16] | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398] |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers:
| + | '''1''' reactions found over '''3''' reactions in the full pathway |
| − | ** 1 [[CYS-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-CYS-tRNAs]][c]
| + | * [[RXN-8028]] |
| − | * With common name(s): | + | ** 2 associated gene(s): |
| − | ** 1 a tRNAcys[c] '''+''' 1 ATP[c] '''+''' 1 L-cysteine[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-cysteinyl-[tRNAcys][c] | + | *** [[CHC_T00002318001_1]] |
| − | | + | *** [[CHC_T00003979001_1]] |
| − | == Genes associated with this reaction ==
| + | ** 1 reconstruction source(s) associated: |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | *** [[orthology-ectocarpus_siliculosus]] |
| − | * [[CHC_T00009398001]] | + | == Reaction(s) not found == |
| − | ** ORIGINAL_GENOME | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8029 RXN-8029] |
| − | ***AUTOMATED-NAME-MATCH
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8030 RXN-8030] |
| − | * [[CHC_T00002892001_1]] | + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]] | + | |
| − | * [[CHC_T00009398001_1]] | + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]] | + | |
| − | == Pathways == | + | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | + | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]: | + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: common name=lactucaxanthin biosynthesis}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03650 R03650]
| + | {{#set: taxonomic range=TAX-3398}} |
| − | * UNIPROT:
| + | {{#set: reaction found=1}} |
| − | ** [http://www.uniprot.org/uniprot/Q9PPB8 Q9PPB8]
| + | {{#set: total reaction=3}} |
| − | ** [http://www.uniprot.org/uniprot/Q06752 Q06752]
| + | {{#set: completion rate=33.0}} |
| − | ** [http://www.uniprot.org/uniprot/P43816 P43816]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O29836 O29836]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CEJ0 Q9CEJ0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O58370 O58370]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83129 O83129]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZE62 Q9ZE62]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZKW6 Q9ZKW6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9WZH8 Q9WZH8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41259 P41259]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51545 O51545]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z6X4 Q9Z6X4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67163 O67163]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JWJ3 Q9JWJ3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47495 P47495]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75423 P75423]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P74330 P74330]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9UWP2 Q9UWP2]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21888 P21888]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=Cysteinyl-tRNA Synthetase}} | + | |
| − | {{#set: ec number=EC-6.1.1.16}} | + | |
| − | {{#set: gene associated=CHC_T00009398001|CHC_T00002892001_1|CHC_T00009398001_1}} | + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}} | + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
