Difference between revisions of "PWY-6142"

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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142] ==
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* taxonomic range:
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
 
* common name:
 
* common name:
−
** putrescine biosynthesis III
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** gluconeogenesis II (Methanobacterium thermoautotrophicum)
 +
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* Synonym(s):
 
* Synonym(s):
−
** ODC pathway
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** carbohydrate biosynthesis (Methanobacterium thermoautotrophicum)
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''1''' reactions in the full pathway
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  '''10''' reactions found over '''15''' reactions in the full pathway
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* [[ORNDECARBOX-RXN]]
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* [[2PGADEHYDRAT-RXN]]
 +
** 5 associated gene(s):
 +
*** [[CHC_T00008696001]]
 +
*** [[CHC_T00008696001_1]]
 +
*** [[CHC_T00009127001_1]]
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*** [[CHC_T00008490001]]
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*** [[CHC_T00009127001]]
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** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[3PGAREARR-RXN]]
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** 6 associated gene(s):
 +
*** [[CHC_T00001519001_1]]
 +
*** [[CHC_T00004490001_1]]
 +
*** [[CHC_T00004201001_1]]
 +
*** [[CHC_T00007707001_1]]
 +
*** [[CHC_T00000449001_1]]
 +
*** [[CHC_T00001241001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[F16ALDOLASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00008586001]]
 +
*** [[CHC_T00008586001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PEPCARBOX-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00008437001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PEPDEPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[CHC_T00008530001]]
 +
*** [[CHC_T00008652001]]
 +
*** [[CHC_T00008652001_1]]
 +
*** [[CHC_T00008482001_1]]
 +
*** [[CHC_T00008482001]]
 +
*** [[CHC_T00008530001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PGLUCISOM-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009370001]]
 +
*** [[CHC_T00009370001_1]]
 +
*** [[CHC_T00008268001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PYRUFLAVREDUCT-RXN]]
 +
** 9 associated gene(s):
 +
*** [[CHC_T00008442001_1]]
 +
*** [[CHC_T00003376001_1]]
 +
*** [[CHC_T00001730001_1]]
 +
*** [[CHC_T00001454001_1]]
 +
*** [[CHC_T00003402001_1]]
 +
*** [[CHC_T00000866001_1]]
 +
*** [[CHC_T00009061001_1]]
 +
*** [[CHC_T00008758001_1]]
 +
*** [[CHC_T00000865001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PYRUVATE-CARBOXYLASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00009426001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN0-5224]]
 +
** 6 associated gene(s):
 +
*** [[CHC_T00010321001_1]]
 +
*** [[CHC_T00010062001_1]]
 +
*** [[CHC_T00002086001_1]]
 +
*** [[CHC_T00010311001_1]]
 +
*** [[CHC_T00007098001_1]]
 +
*** [[CHC_T00010321001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[TRIOSEPISOMERIZATION-RXN]]
 +
** 5 associated gene(s):
 +
*** [[CHC_T00009126001_1]]
 +
*** [[CHC_T00009523001_1]]
 +
*** [[CHC_T00009126001]]
 +
*** [[CHC_T00009545001]]
 +
*** [[CHC_T00009545001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.6-RXN 1.2.7.6-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PEPSYNTH-RXN PEPSYNTH-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-7784 PWY-7784]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-7784 PWY-7784]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R302-RXN R302-RXN]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
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{{#set: common name=gluconeogenesis II (Methanobacterium thermoautotrophicum)}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-46 PWY-46]
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{{#set: taxonomic range=TAX-2157}}
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* ARACYC:
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{{#set: common name=carbohydrate biosynthesis (Methanobacterium thermoautotrophicum)}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-46 PWY-46]
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{{#set: reaction found=10}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: total reaction=15}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: completion rate=67.0}}
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{{#set: common name=putrescine biosynthesis III}}
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−
{{#set: common name=ODC pathway}}
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−
{{#set: reaction found=1}}
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−
{{#set: reaction not found=1}}
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−
{{#set: completion rate=100.0}}
+

Latest revision as of 16:44, 9 January 2019

Pathway PWY-6142

  • common name:
    • gluconeogenesis II (Methanobacterium thermoautotrophicum)
  • taxonomic range:
  • Synonym(s):
    • carbohydrate biosynthesis (Methanobacterium thermoautotrophicum)

Reaction(s) found

10 reactions found over 15 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6142&oldid=20745"