Difference between revisions of "RXN0-1461"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene CHC_T00009498001_1 == * Synonym(s): == Reactions associated == * UDPGLUCEPIM-RXN ** pantograph-galdieria.sulphuraria ** pantograph-[...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene CHC_T00009498001_1 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1461 RXN0-1461] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.3.3 EC-1.3.3.3]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[UDPGLUCEPIM-RXN]]
+
* With identifiers:
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 2 [[PROTON]][c] '''+''' 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PROTOPORPHYRINOGEN]][c] '''+''' 2 [[WATER]][c] '''+''' 2 [[CARBON-DIOXIDE]][c]
−
** [[pantograph]]-[[a.taliana]]
+
* With common name(s):
−
== Pathways associated ==
+
** 2 H+[c] '''+''' 1 coproporphyrinogen III[c] '''+''' 1 oxygen[c] '''=>''' 1 protoporphyrinogen IX[c] '''+''' 2 H2O[c] '''+''' 2 CO2[c]
−
* [[PWY-7344]]
+
 
−
* [[PWY-6397]]
+
== Genes associated with this reaction  ==
−
* [[COLANSYN-PWY]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-6527]]
+
* Gene: [[CHC_T00003096001_1]]
−
* [[PWY-7328]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[PWY-6317]]
+
* Gene: [[CHC_T00002160001_1]]
−
* [[PWY66-422]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[PWY-3821]]
+
* Gene: [[CHC_T00008857001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
== Pathways ==
 +
* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=UDPGLUCEPIM-RXN}}
+
* RHEA:
−
{{#set: pathway associated=PWY-7344|PWY-6397|COLANSYN-PWY|PWY-6527|PWY-7328|PWY-6317|PWY66-422|PWY-3821}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18257 18257]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9RLE1 Q9RLE1]
 +
** [http://www.uniprot.org/uniprot/P36552 P36552]
 +
** [http://www.uniprot.org/uniprot/O25376 O25376]
 +
** [http://www.uniprot.org/uniprot/P36553 P36553]
 +
** [http://www.uniprot.org/uniprot/P33771 P33771]
 +
** [http://www.uniprot.org/uniprot/P43899 P43899]
 +
** [http://www.uniprot.org/uniprot/O25824 O25824]
 +
** [http://www.uniprot.org/uniprot/P54304 P54304]
 +
** [http://www.uniprot.org/uniprot/P11353 P11353]
 +
** [http://www.uniprot.org/uniprot/Q8X8G8 Q8X8G8]
 +
** [http://www.uniprot.org/uniprot/Q9ZC86 Q9ZC86]
 +
** [http://www.uniprot.org/uniprot/P36551 P36551]
 +
** [http://www.uniprot.org/uniprot/P35055 P35055]
 +
** [http://www.uniprot.org/uniprot/P43898 P43898]
 +
** [http://www.uniprot.org/uniprot/P72848 P72848]
 +
** [http://www.uniprot.org/uniprot/P73245 P73245]
 +
** [http://www.uniprot.org/uniprot/P74132 P74132]
 +
** [http://www.uniprot.org/uniprot/Q51676 Q51676]
 +
** [http://www.uniprot.org/uniprot/Q42946 Q42946]
 +
** [http://www.uniprot.org/uniprot/Q42840 Q42840]
 +
** [http://www.uniprot.org/uniprot/Q39581 Q39581]
 +
** [http://www.uniprot.org/uniprot/P95651 P95651]
 +
** [http://www.uniprot.org/uniprot/Q9RFG1 Q9RFG1]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03220 R03220]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.3.3.3}}
 +
{{#set: gene associated=CHC_T00003096001_1|CHC_T00002160001_1|CHC_T00008857001_1}}
 +
{{#set: in pathway=PWY0-1415|CHLOROPHYLL-SYN|HEME-BIOSYNTHESIS-II|PWY-7159}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:46, 9 January 2019

Reaction RXN0-1461

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1415, superpathway of heme biosynthesis from uroporphyrinogen-III: PWY0-1415
    • 5 reactions found over 6 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 9 reactions found over 9 reactions in the full pathway
  • HEME-BIOSYNTHESIS-II, heme biosynthesis I (aerobic): HEME-BIOSYNTHESIS-II
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-1461&oldid=20790"