Difference between revisions of "ARGININE-DEIMINASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14719 CPD-14719] == * smiles: ** CCCCCCCCCCCCCCCC[CH]=O * common name: ** heptadecanal * in...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14719 CPD-14719] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-DEIMINASE-RXN ARGININE-DEIMINASE-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCCCC[CH]=O
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** REVERSIBLE
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* common name:
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* ec number:
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** heptadecanal
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** [http://enzyme.expasy.org/EC/3.5.3.6 EC-3.5.3.6]
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* inchi key:
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** InChIKey=PIYDVAYKYBWPPY-UHFFFAOYSA-N
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* molecular weight:
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** 254.455   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN66-476-CPD-14719/NAD/WATER//CPD-7830/NADH/PROTON.42.]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[ARG]][c] '''<=>''' 1 [[L-CITRULLINE]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32.]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 L-arginine[c] '''<=>''' 1 L-citrulline[c] '''+''' 1 ammonium[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008387001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[ARGDEGRAD-PWY]], L-arginine degradation V (arginine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEGRAD-PWY ARGDEGRAD-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71552 71552]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19597 19597]
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* HMDB : HMDB31039
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* UNIPROT:
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{{#set: smiles=CCCCCCCCCCCCCCCC[CH]=O}}
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** [http://www.uniprot.org/uniprot/P23793 P23793]
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{{#set: common name=heptadecanal}}
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** [http://www.uniprot.org/uniprot/P58013 P58013]
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{{#set: inchi key=InChIKey=PIYDVAYKYBWPPY-UHFFFAOYSA-N}}
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** [http://www.uniprot.org/uniprot/P13981 P13981]
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{{#set: molecular weight=254.455    }}
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** [http://www.uniprot.org/uniprot/P75218 P75218]
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{{#set: consumed by=RXN66-476-CPD-14719/NAD/WATER//CPD-7830/NADH/PROTON.42.}}
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** [http://www.uniprot.org/uniprot/Q48294 Q48294]
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{{#set: produced by=RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32.}}
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** [http://www.uniprot.org/uniprot/Q27657 Q27657]
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** [http://www.uniprot.org/uniprot/O53088 O53088]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00552 R00552]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-3.5.3.6}}
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{{#set: gene associated=CHC_T00008387001_1}}
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{{#set: in pathway=PWY-4981|ARGDEGRAD-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:49, 9 January 2019

Reaction ARGININE-DEIMINASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-arginine[c] <=> 1 L-citrulline[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 5 reactions found over 6 reactions in the full pathway
  • ARGDEGRAD-PWY, L-arginine degradation V (arginine deiminase pathway): ARGDEGRAD-PWY
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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