Difference between revisions of "PWY-1042"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ORNITHINE L-ORNITHINE] == * smiles: ** C(C[N+])CC([N+])C([O-])=O * inchi key: ** InChIKey=AHL...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ORNITHINE L-ORNITHINE] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] ==
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* smiles:
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** C(C[N+])CC([N+])C([O-])=O
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* inchi key:
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** InChIKey=AHLPHDHHMVZTML-BYPYZUCNSA-O
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* common name:
 
* common name:
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** L-ornithine
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** glycolysis IV (plant cytosol)
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* molecular weight:
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* taxonomic range:
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** 133.17   
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* Synonym(s):
 
* Synonym(s):
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** Ornithine
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** glycolysis 4
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** 2, 5-diaminovaleric acid
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** 2, 5-diaminopentanoic acid
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** 2, 5-diaminopentanoate
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** α,δ-diaminovaleric acid
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[ORNITHINE-CYCLODEAMINASE-RXN]]
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'''9''' reactions found over '''10''' reactions in the full pathway
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* [[ORNDECARBOX-RXN]]
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* [[2.7.1.90-RXN]]
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== Reaction(s) known to produce the compound ==
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** 2 associated gene(s):
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* [[GLUTAMATE-N-ACETYLTRANSFERASE-RXN]]
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*** [[CHC_T00009387001]]
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== Reaction(s) of unknown directionality ==
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*** [[CHC_T00007415001_1]]
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* [[RXN-13482]]
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** 2 reconstruction source(s) associated:
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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*** [[annotation-original_genome]]
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* [[ACETYLORNDEACET-RXN]]
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* [[2PGADEHYDRAT-RXN]]
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* [[ORNCARBAMTRANSFER-RXN]]
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** 5 associated gene(s):
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* [[ARGINASE-RXN]]
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*** [[CHC_T00008696001]]
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*** [[CHC_T00008696001_1]]
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*** [[CHC_T00009127001_1]]
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*** [[CHC_T00008490001]]
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*** [[CHC_T00009127001]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[3PGAREARR-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00001519001_1]]
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*** [[CHC_T00004490001_1]]
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*** [[CHC_T00004201001_1]]
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*** [[CHC_T00007707001_1]]
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*** [[CHC_T00000449001_1]]
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*** [[CHC_T00001241001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[6PFRUCTPHOS-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00009387001_1]]
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*** [[CHC_T00008955001]]
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*** [[CHC_T00007415001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[F16ALDOLASE-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00008586001]]
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*** [[CHC_T00008586001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00009438001_1]]
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*** [[CHC_T00009523001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PEPDEPHOS-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00008530001]]
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*** [[CHC_T00008652001]]
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*** [[CHC_T00008652001_1]]
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*** [[CHC_T00008482001_1]]
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*** [[CHC_T00008482001]]
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*** [[CHC_T00008530001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PHOSGLYPHOS-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00004105001_1]]
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*** [[CHC_T00009179001]]
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*** [[CHC_T00009179001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 5 associated gene(s):
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*** [[CHC_T00009126001_1]]
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*** [[CHC_T00009523001_1]]
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*** [[CHC_T00009126001]]
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*** [[CHC_T00009545001]]
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*** [[CHC_T00009545001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.9-RXN 1.2.1.9-RXN]
 
== External links  ==
 
== External links  ==
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* METABOLIGHTS : MTBLC46911
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* ARACYC:
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* PUBCHEM:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1042 PWY-1042]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6992088 6992088]
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{{#set: common name=glycolysis IV (plant cytosol)}}
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* HMDB : HMDB00214
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-CPD:
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{{#set: common name=glycolysis 4}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00077 C00077]
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{{#set: reaction found=9}}
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* CHEMSPIDER:
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{{#set: total reaction=10}}
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** [http://www.chemspider.com/Chemical-Structure.5360242.html 5360242]
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{{#set: completion rate=90.0}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=46911 46911]
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* BIGG : orn
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{{#set: smiles=C(C[N+])CC([N+])C([O-])=O}}
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{{#set: inchi key=InChIKey=AHLPHDHHMVZTML-BYPYZUCNSA-O}}
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{{#set: common name=L-ornithine}}
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{{#set: molecular weight=133.17    }}
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{{#set: common name=Ornithine|2, 5-diaminovaleric acid|2, 5-diaminopentanoic acid|2, 5-diaminopentanoate|α,δ-diaminovaleric acid}}
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{{#set: consumed by=ORNITHINE-CYCLODEAMINASE-RXN|ORNDECARBOX-RXN}}
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{{#set: produced by=GLUTAMATE-N-ACETYLTRANSFERASE-RXN}}
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{{#set: consumed or produced by=RXN-13482|ORNITHINE-GLU-AMINOTRANSFERASE-RXN|ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN|ACETYLORNDEACET-RXN|ORNCARBAMTRANSFER-RXN|ARGINASE-RXN}}
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Latest revision as of 16:50, 9 January 2019

Pathway PWY-1042

  • common name:
    • glycolysis IV (plant cytosol)
  • taxonomic range:
  • Synonym(s):
    • glycolysis 4

Reaction(s) found

9 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-1042&oldid=20884"