Difference between revisions of "PWY-6857"

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(Created page with "Category:Gene == Gene CHC_T00009531001 == * left end position: ** 171786 * transcription direction: ** NEGATIVE * right end position: ** 173804 * centisome position: ** 26...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene CHC_T00009531001 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857] ==
* left end position:
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* common name:
** 171786
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** retinol biosynthesis
* transcription direction:
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* taxonomic range:
** NEGATIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
* right end position:
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** 173804
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* centisome position:
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** 26.294554   
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* Synonym(s):
 
* Synonym(s):
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** vitamin A biosynthesis
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** retinal biosynthesis
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** retinoid biosynthesis
  
== Reactions associated ==
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== Reaction(s) found ==
* [[ACYL-COA-OXIDASE-RXN]]
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'''3''' reactions found over '''7''' reactions in the full pathway
** original_genome
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* [[RXN-10841]]
***automated-name-match
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** 1 associated gene(s):
* [[RXN-10696]]
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*** [[CHC_T00009571001_1]]
** original_genome
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** 1 reconstruction source(s) associated:
***automated-name-match
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*** [[orthology-arabidopsis_thaliana]]
* [[RXN-10706]]
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* [[RXN-12575]]
** original_genome
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** 3 associated gene(s):
***automated-name-match
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*** [[CHC_T00000998001_1]]
* [[RXN-10707]]
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*** [[CHC_T00003680001_1]]
** original_genome
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*** [[CHC_T00008784001]]
***automated-name-match
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** 2 reconstruction source(s) associated:
* [[RXN-11026]]
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*** [[annotation-original_genome]]
** original_genome
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*** [[orthology-ectocarpus_siliculosus]]
***automated-name-match
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* [[RXN-12579]]
* [[RXN-12518]]
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** 8 associated gene(s):
** original_genome
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*** [[CHC_T00000853001_1]]
***automated-name-match
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*** [[CHC_T00000197001_1]]
* [[RXN-12669]]
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*** [[CHC_T00009491001_1]]
** original_genome
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*** [[CHC_T00000198001_1]]
***automated-name-match
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*** [[CHC_T00005737001_1]]
* [[RXN-14576]]
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*** [[CHC_T00008615001_1]]
** original_genome
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*** [[CHC_T00009452001_1]]
***automated-name-match
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*** [[CHC_T00002434001_1]]
* [[RXN-14771]]
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** 2 reconstruction source(s) associated:
** original_genome
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*** [[orthology-galdieria.sulphuraria]]
***automated-name-match
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*** [[orthology-ectocarpus_siliculosus]]
* [[RXN-14775]]
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== Reaction(s) not found ==
** original_genome
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.135-RXN 2.3.1.135-RXN]
***automated-name-match
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12548 RXN-12548]
* [[RXN-14785]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12549 RXN-12549]
** original_genome
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13374 RXN-13374]
***automated-name-match
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* [[RXN-14789]]
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** original_genome
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***automated-name-match
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* [[RXN-14796]]
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** original_genome
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***automated-name-match
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* [[RXN-16134]]
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** original_genome
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***automated-name-match
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* [[RXN-17113]]
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** original_genome
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***automated-name-match
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== Pathways associated ==
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* [[PWY-6920]]
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* [[PWY-7340]]
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* [[PWY-7291]]
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* [[PWY-735]]
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* [[PWY-7606]]
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* [[PWY-7338]]
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* [[PWY-6837]]
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* [[PWY66-391]]
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* [[PWY-5136]]
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* [[PWY-7007]]
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* [[PWY-7337]]
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* [[PWY-7288]]
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* [[PWY-7726]]
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== External links  ==
 
== External links  ==
{{#set: left end position=171786}}
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{{#set: common name=retinol biosynthesis}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: taxonomic range=TAX-33208}}
{{#set: right end position=173804}}
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{{#set: common name=vitamin A biosynthesis|retinal biosynthesis|retinoid biosynthesis}}
{{#set: centisome position=26.294554    }}
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{{#set: reaction found=3}}
{{#set: reaction associated=ACYL-COA-OXIDASE-RXN|RXN-10696|RXN-10706|RXN-10707|RXN-11026|RXN-12518|RXN-12669|RXN-14576|RXN-14771|RXN-14775|RXN-14785|RXN-14789|RXN-14796|RXN-16134|RXN-17113}}
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{{#set: total reaction=7}}
{{#set: pathway associated=PWY-6920|PWY-7340|PWY-7291|PWY-735|PWY-7606|PWY-7338|PWY-6837|PWY66-391|PWY-5136|PWY-7007|PWY-7337|PWY-7288|PWY-7726}}
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{{#set: completion rate=43.0}}

Latest revision as of 16:55, 9 January 2019

Pathway PWY-6857

  • common name:
    • retinol biosynthesis
  • taxonomic range:
  • Synonym(s):
    • vitamin A biosynthesis
    • retinal biosynthesis
    • retinoid biosynthesis

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links