Difference between revisions of "CYTIDEAM2-RXN"

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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/3.5.4.5 EC-3.5.4.5]
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* common name:
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** L-homoserine biosynthesis
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CYTIDINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[URIDINE]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[ASPARTATEKIN-RXN]]
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* With common name(s):
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* [[HOMOSERDEHYDROG-RXN]]
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** 1 H2O[c] '''+''' 1 cytidine[c] '''+''' 1 H+[c] '''=>''' 1 uridine[c] '''+''' 1 ammonium[c]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00000921001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways ==
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* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6556]], pyrimidine ribonucleosides salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
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{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/P47718 P47718]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
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{{#set: common name=L-homoserine biosynthesis}}
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** [http://www.uniprot.org/uniprot/P47298 P47298]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
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{{#set: reaction not found=3}}
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** [http://www.uniprot.org/uniprot/P32320 P32320]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P75051 P75051]
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** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
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** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
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** [http://www.uniprot.org/uniprot/O65571 O65571]
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** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
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** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
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** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
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** [http://www.uniprot.org/uniprot/O65896 O65896]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01878 R01878]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.4.5}}
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{{#set: gene associated=CHC_T00000921001_1}}
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{{#set: in pathway=PWY-7193|PWY-6556|PWY0-1295}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:55, 9 January 2019

Reaction CYTIDEAM2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 cytidine[c] + 1 H+[c] => 1 uridine[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7193, pyrimidine ribonucleosides salvage I: PWY-7193
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6556, pyrimidine ribonucleosides salvage II: PWY-6556
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1295, pyrimidine ribonucleosides degradation: PWY0-1295
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CYTIDEAM2-RXN&oldid=20992"