Difference between revisions of "RXN-5466"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** L-ascorbate degradation II (bacterial, aerobic)
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** [http://enzyme.expasy.org/EC/2.4.1.258 EC-2.4.1.258]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''3''' reaction(s) found
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* With identifiers:
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** [[RXN-12440]]
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** 1 [[CPD-5164]][c] '''+''' 1 [[CPD-171]][c] '''=>''' 1 [[CPD-5165]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
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** [[RXN-12861]]
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* With common name(s):
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** [[RXN-12862]]
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** 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-mannosyl phosphate[c] '''=>''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 H+[c]
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== Reaction(s) not found ==
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* '''5''' reaction(s) not found
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN0-704 RXN0-704]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=LXULRU5P-RXN LXULRU5P-RXN]
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* Gene: [[CHC_T00009519001_1]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN0-703 RXN0-703]
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** Source: [[orthology-galdieria.sulphuraria]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RIBULPEPIM-RXN RIBULPEPIM-RXN]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN0-705 RXN0-705]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6961 PWY-6961]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29530 29530]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=L-ascorbate degradation II (bacterial, aerobic)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06258 R06258]
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{{#set: reaction found=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction not found=5}}
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{{#set: ec number=EC-2.4.1.258}}
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{{#set: gene associated=CHC_T00009519001_1}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:55, 9 January 2019

Reaction RXN-5466

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl β-D-mannosyl phosphate[c] => 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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