|
|
(2 intermediate revisions by the same user not shown) |
Line 1: |
Line 1: |
− | [[Category:Metabolite]] | + | [[Category:Pathway]] |
− | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMMONIUM AMMONIUM] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6524 PWY-6524] == |
− | * smiles:
| + | |
− | ** [NH4+]
| + | |
− | * inchi key:
| + | |
− | ** InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O
| + | |
| * common name: | | * common name: |
− | ** ammonium | + | ** lychnose and isolychnose biosynthesis |
− | * molecular weight: | + | * taxonomic range: |
− | ** 18.038 | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3568 TAX-3568] |
| * Synonym(s): | | * Synonym(s): |
− | ** NH4+
| |
| | | |
− | == Reaction(s) known to consume the compound == | + | == Reaction(s) found == |
− | * [[GLUTAMINESYN-RXN]]
| + | '''1''' reactions found over '''4''' reactions in the full pathway |
− | * [[DIPHTINE--AMMONIA-LIGASE-RXN]]
| + | * [[2.4.1.82-RXN]] |
− | * [[ASNSYNA-RXN]]
| + | ** 1 associated gene(s): |
− | * [[RXN-13202]]
| + | *** [[CHC_T00008780001]] |
− | * [[GMP-SYN-NH3-RXN]]
| + | ** 1 reconstruction source(s) associated: |
− | * [[TransportSeed_AMMONIUM]]
| + | *** [[annotation-original_genome]] |
− | * [[RXN-9615]]
| + | == Reaction(s) not found == |
− | * [[RXN-16910]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN] |
− | * [[RXN-14325]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-11490 RXN-11490] |
− | == Reaction(s) known to produce the compound ==
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-15224 RXN-15224] |
− | * [[BETA-UREIDOPROPIONASE-RXN]]
| + | |
− | * [[RXN0-1081]]
| + | |
− | * [[RXN0-5222]]
| + | |
− | * [[CYTIDEAM-RXN]]
| + | |
− | * [[DCMP-DEAMINASE-RXN]]
| + | |
− | * [[TransportSeed_AMMONIUM]]
| + | |
− | * [[GLUTAMIN-RXN]]
| + | |
− | * [[RXN-18229]]
| + | |
− | * [[ADENODEAMIN-RXN]]
| + | |
− | * [[AMP-DEAMINASE-RXN]]
| + | |
− | * [[RXN-12878]]
| + | |
− | * [[RXN-8163]]
| + | |
− | * [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
| + | |
− | * [[RXN-11210]]
| + | |
− | * [[RXN-9615]]
| + | |
− | * [[ALLOPHANATE-HYDROLASE-RXN]]
| + | |
− | * [[PHENYLALANINE-AMMONIA-LYASE-RXN]]
| + | |
− | * [[PMPOXI-RXN]]
| + | |
− | * [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
| + | |
− | * [[CYTIDEAM2-RXN]]
| + | |
− | * [[RIBOFLAVINSYNDEAM-RXN]]
| + | |
− | * [[RXN-646]]
| + | |
− | * [[CYSTATHIONINE-BETA-LYASE-RXN]]
| + | |
− | * [[ORNITHINE-CYCLODEAMINASE-RXN]]
| + | |
− | * [[ASPARAGHYD-RXN]]
| + | |
− | * [[THREDEHYD-RXN]]
| + | |
− | * [[ETHAMLY-RXN]]
| + | |
− | * [[RXN-1404]]
| + | |
− | * [[4.3.1.17-RXN]] | + | |
− | * [[OHMETHYLBILANESYN-RXN]] | + | |
− | * [[METBALT-RXN]] | + | |
− | * [[1.4.3.19-RXN]]
| + | |
− | * [[RXN-15127]] | + | |
− | * [[D-AMINO-ACID-OXIDASE-RXN]] | + | |
− | * [[RXN-8899]] | + | |
− | * [[RXN-12729]] | + | |
− | * [[NICOTINAMID-RXN]] | + | |
− | * [[RXN-8672]] | + | |
− | * [[ADDALT-RXN]] | + | |
− | == Reaction(s) of unknown directionality == | + | |
− | * [[GLUTAMATE-DEHYDROGENASE-NADP+-RXN]] | + | |
− | * [[ExchangeSeed_AMMONIUM]]
| + | |
− | * [[GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.]]
| + | |
− | * [[3.5.5.1-RXN]]
| + | |
− | * [[GLUTAMATE-DEHYDROGENASE-RXN]] | + | |
− | * [[ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN]]
| + | |
− | * [[ARGININE-DEIMINASE-RXN]]
| + | |
− | * [[RXN-17607]] | + | |
− | * [[RXN-11811]]
| + | |
− | * [[GCVT-RXN]]
| + | |
− | * [[GLUTDEHYD-RXN]]
| + | |
− | * [[3.5.1.87-RXN]]
| + | |
| == External links == | | == External links == |
− | * CAS : 14798-03-9
| + | {{#set: common name=lychnose and isolychnose biosynthesis}} |
− | * METABOLIGHTS : MTBLC28938
| + | {{#set: taxonomic range=TAX-3568}} |
− | * PUBCHEM:
| + | {{#set: reaction found=1}} |
− | ** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=223 223]
| + | {{#set: total reaction=4}} |
− | * HMDB : HMDB41827
| + | {{#set: completion rate=25.0}} |
− | * LIGAND-CPD:
| + | |
− | ** [http://www.genome.jp/dbget-bin/www_bget?C01342 C01342]
| + | |
− | * CHEMSPIDER:
| + | |
− | ** [http://www.chemspider.com/Chemical-Structure.218.html 218]
| + | |
− | * CHEBI:
| + | |
− | ** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28938 28938]
| + | |
− | * BIGG : nh4
| + | |
− | {{#set: smiles=[NH4+]}}
| + | |
− | {{#set: inchi key=InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O}}
| + | |
− | {{#set: common name=ammonium}} | + | |
− | {{#set: molecular weight=18.038 }} | + | |
− | {{#set: common name=NH4+}} | + | |
− | {{#set: consumed by=GLUTAMINESYN-RXN|DIPHTINE--AMMONIA-LIGASE-RXN|ASNSYNA-RXN|RXN-13202|GMP-SYN-NH3-RXN|TransportSeed_AMMONIUM|RXN-9615|RXN-16910|RXN-14325}} | + | |
− | {{#set: produced by=BETA-UREIDOPROPIONASE-RXN|RXN0-1081|RXN0-5222|CYTIDEAM-RXN|DCMP-DEAMINASE-RXN|TransportSeed_AMMONIUM|GLUTAMIN-RXN|RXN-18229|ADENODEAMIN-RXN|AMP-DEAMINASE-RXN|RXN-12878|RXN-8163|N-CARBAMOYLPUTRESCINE-AMIDASE-RXN|RXN-11210|RXN-9615|ALLOPHANATE-HYDROLASE-RXN|PHENYLALANINE-AMMONIA-LYASE-RXN|PMPOXI-RXN|FERREDOXIN--NITRITE-REDUCTASE-RXN|CYTIDEAM2-RXN|RIBOFLAVINSYNDEAM-RXN|RXN-646|CYSTATHIONINE-BETA-LYASE-RXN|ORNITHINE-CYCLODEAMINASE-RXN|ASPARAGHYD-RXN|THREDEHYD-RXN|ETHAMLY-RXN|RXN-1404|4.3.1.17-RXN|OHMETHYLBILANESYN-RXN|METBALT-RXN|1.4.3.19-RXN|RXN-15127|D-AMINO-ACID-OXIDASE-RXN|RXN-8899|RXN-12729|NICOTINAMID-RXN|RXN-8672|ADDALT-RXN}}
| + | |
− | {{#set: consumed or produced by=GLUTAMATE-DEHYDROGENASE-NADP+-RXN|ExchangeSeed_AMMONIUM|GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.|3.5.5.1-RXN|GLUTAMATE-DEHYDROGENASE-RXN|ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN|ARGININE-DEIMINASE-RXN|RXN-17607|RXN-11811|GCVT-RXN|GLUTDEHYD-RXN|3.5.1.87-RXN}} | + | |