Difference between revisions of "PWY-5537"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINESYN-RXN GLUTAMINESYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINESYN-RXN GLUTAMINESYN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537] ==
−
* direction:
+
* common name:
−
** LEFT-TO-RIGHT
+
** pyruvate fermentation to acetate V
−
* ec number:
+
* taxonomic range:
−
** [http://enzyme.expasy.org/EC/6.3.1.2 EC-6.3.1.2]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
 
* Synonym(s):
 
* Synonym(s):
−
** type I glutamate--ammonia ligase
+
** acetate fermentation
 +
** acetate:succinate CoA transferase/SCoAS cycle
 +
** ASCT cycle
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[ADP]][c]
+
* [[PYRUVDEH-RXN]]
−
* With common name(s):
+
** 7 associated gene(s):
−
** 1 L-glutamate[c] '''+''' 1 ATP[c] '''+''' 1 ammonium[c] '''=>''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 L-glutamine[c] '''+''' 1 ADP[c]
+
*** [[CHC_T00010287001_1]]
−
 
+
*** [[CHC_T00008732001_1]]
−
== Genes associated with this reaction  ==
+
*** [[CHC_T00008442001_1]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[CHC_T00008441001_1]]
−
* [[CHC_T00010135001_1]]
+
*** [[CHC_T00008732001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** [[CHC_T00007488001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
*** [[CHC_T00007380001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** 3 reconstruction source(s) associated:
−
** [[pantograph]]-[[a.taliana]]
+
*** [[annotation-original_genome]]
−
* [[CHC_T00005451001_1]]
+
*** [[orthology-arabidopsis_thaliana]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[a.taliana]]
+
* [[SUCCCOASYN-RXN]]
−
** [[pantograph]]-[[a.taliana]]
+
** 2 associated gene(s):
−
** [[pantograph]]-[[a.taliana]]
+
*** [[CHC_T00009212001_1]]
−
* [[CHC_T00005454001_1]]
+
*** [[CHC_T00008602001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 3 reconstruction source(s) associated:
−
** [[pantograph]]-[[a.taliana]]
+
*** [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
*** [[orthology-arabidopsis_thaliana]]
−
** [[pantograph]]-[[a.taliana]]
+
*** [[orthology-ectocarpus_siliculosus]]
−
== Pathways  ==
+
== Reaction(s) not found ==
−
* [[GLNSYN-PWY]], L-glutamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLNSYN-PWY GLNSYN-PWY]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5536 PWY-5536]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5536 PWY-5536]
−
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6963]], ammonia assimilation cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6963 PWY-6963]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
*** [[a.taliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=pyruvate fermentation to acetate V}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16169 16169]
+
{{#set: taxonomic range=TAX-33682}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33154}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00253 R00253]
+
{{#set: common name=acetate fermentation|acetate:succinate CoA transferase/SCoAS cycle|ASCT cycle}}
−
* UNIPROT:
+
{{#set: reaction found=2}}
−
** [http://www.uniprot.org/uniprot/P15103 P15103]
+
{{#set: total reaction=4}}
−
** [http://www.uniprot.org/uniprot/P15124 P15124]
+
{{#set: completion rate=50.0}}
−
** [http://www.uniprot.org/uniprot/P15623 P15623]
+
−
** [http://www.uniprot.org/uniprot/P21154 P21154]
+
−
** [http://www.uniprot.org/uniprot/P45627 P45627]
+
−
** [http://www.uniprot.org/uniprot/Q59982 Q59982]
+
−
** [http://www.uniprot.org/uniprot/Q7M314 Q7M314]
+
−
** [http://www.uniprot.org/uniprot/Q60182 Q60182]
+
−
** [http://www.uniprot.org/uniprot/P04078 P04078]
+
−
** [http://www.uniprot.org/uniprot/P00964 P00964]
+
−
** [http://www.uniprot.org/uniprot/P22248 P22248]
+
−
** [http://www.uniprot.org/uniprot/P07804 P07804]
+
−
** [http://www.uniprot.org/uniprot/P13564 P13564]
+
−
** [http://www.uniprot.org/uniprot/P12425 P12425]
+
−
** [http://www.uniprot.org/uniprot/P19064 P19064]
+
−
** [http://www.uniprot.org/uniprot/P16580 P16580]
+
−
** [http://www.uniprot.org/uniprot/P10656 P10656]
+
−
** [http://www.uniprot.org/uniprot/P11600 P11600]
+
−
** [http://www.uniprot.org/uniprot/P0A1P6 P0A1P6]
+
−
** [http://www.uniprot.org/uniprot/P0A9C5 P0A9C5]
+
−
** [http://www.uniprot.org/uniprot/P00965 P00965]
+
−
** [http://www.uniprot.org/uniprot/P04771 P04771]
+
−
** [http://www.uniprot.org/uniprot/P04770 P04770]
+
−
** [http://www.uniprot.org/uniprot/P15102 P15102]
+
−
** [http://www.uniprot.org/uniprot/P10583 P10583]
+
−
** [http://www.uniprot.org/uniprot/P23712 P23712]
+
−
** [http://www.uniprot.org/uniprot/P15105 P15105]
+
−
** [http://www.uniprot.org/uniprot/P08282 P08282]
+
−
** [http://www.uniprot.org/uniprot/P08281 P08281]
+
−
** [http://www.uniprot.org/uniprot/P07694 P07694]
+
−
** [http://www.uniprot.org/uniprot/P09606 P09606]
+
−
** [http://www.uniprot.org/uniprot/P14654 P14654]
+
−
** [http://www.uniprot.org/uniprot/P14655 P14655]
+
−
** [http://www.uniprot.org/uniprot/P14656 P14656]
+
−
** [http://www.uniprot.org/uniprot/P22878 P22878]
+
−
** [http://www.uniprot.org/uniprot/P19432 P19432]
+
−
** [http://www.uniprot.org/uniprot/P15106 P15106]
+
−
** [http://www.uniprot.org/uniprot/P19904 P19904]
+
−
** [http://www.uniprot.org/uniprot/P14636 P14636]
+
−
** [http://www.uniprot.org/uniprot/P04772 P04772]
+
−
** [http://www.uniprot.org/uniprot/P09826 P09826]
+
−
** [http://www.uniprot.org/uniprot/P05457 P05457]
+
−
** [http://www.uniprot.org/uniprot/Q9JSU6 Q9JSU6]
+
−
** [http://www.uniprot.org/uniprot/Q9PPK8 Q9PPK8]
+
−
** [http://www.uniprot.org/uniprot/O66514 O66514]
+
−
** [http://www.uniprot.org/uniprot/Q8X7G0 Q8X7G0]
+
−
** [http://www.uniprot.org/uniprot/Q9CDL9 Q9CDL9]
+
−
** [http://www.uniprot.org/uniprot/Q05650 Q05650]
+
−
** [http://www.uniprot.org/uniprot/P43794 P43794]
+
−
** [http://www.uniprot.org/uniprot/P31592 P31592]
+
−
** [http://www.uniprot.org/uniprot/Q27747 Q27747]
+
−
** [http://www.uniprot.org/uniprot/P12424 P12424]
+
−
** [http://www.uniprot.org/uniprot/Q04831 Q04831]
+
−
** [http://www.uniprot.org/uniprot/P24099 P24099]
+
−
** [http://www.uniprot.org/uniprot/O04998 O04998]
+
−
** [http://www.uniprot.org/uniprot/O04999 O04999]
+
−
** [http://www.uniprot.org/uniprot/P20479 P20479]
+
−
** [http://www.uniprot.org/uniprot/O75014 O75014]
+
−
** [http://www.uniprot.org/uniprot/P23794 P23794]
+
−
** [http://www.uniprot.org/uniprot/Q43127 Q43127]
+
−
** [http://www.uniprot.org/uniprot/Q9FHR0 Q9FHR0]
+
−
** [http://www.uniprot.org/uniprot/Q9C8C7 Q9C8C7]
+
−
** [http://www.uniprot.org/uniprot/P28786 P28786]
+
−
** [http://www.uniprot.org/uniprot/Q02154 Q02154]
+
−
** [http://www.uniprot.org/uniprot/Q05542 Q05542]
+
−
** [http://www.uniprot.org/uniprot/Q42624 Q42624]
+
−
** [http://www.uniprot.org/uniprot/P43518 P43518]
+
−
** [http://www.uniprot.org/uniprot/P52783 P52783]
+
−
** [http://www.uniprot.org/uniprot/Q43759 Q43759]
+
−
** [http://www.uniprot.org/uniprot/P38559 P38559]
+
−
** [http://www.uniprot.org/uniprot/P38560 P38560]
+
−
** [http://www.uniprot.org/uniprot/P38561 P38561]
+
−
** [http://www.uniprot.org/uniprot/P38562 P38562]
+
−
** [http://www.uniprot.org/uniprot/P38563 P38563]
+
−
** [http://www.uniprot.org/uniprot/P25462 P25462]
+
−
** [http://www.uniprot.org/uniprot/Q42625 Q42625]
+
−
** [http://www.uniprot.org/uniprot/P46410 P46410]
+
−
** [http://www.uniprot.org/uniprot/Q42802 Q42802]
+
−
** [http://www.uniprot.org/uniprot/Q42623 Q42623]
+
−
** [http://www.uniprot.org/uniprot/Q53045 Q53045]
+
−
** [http://www.uniprot.org/uniprot/P32288 P32288]
+
−
** [http://www.uniprot.org/uniprot/Q43066 Q43066]
+
−
** [http://www.uniprot.org/uniprot/Q59195 Q59195]
+
−
** [http://www.uniprot.org/uniprot/P51118 P51118]
+
−
** [http://www.uniprot.org/uniprot/P51119 P51119]
+
−
** [http://www.uniprot.org/uniprot/Q42950 Q42950]
+
−
** [http://www.uniprot.org/uniprot/Q42951 Q42951]
+
−
** [http://www.uniprot.org/uniprot/Q07939 Q07939]
+
−
** [http://www.uniprot.org/uniprot/Q43760 Q43760]
+
−
** [http://www.uniprot.org/uniprot/Q42688 Q42688]
+
−
** [http://www.uniprot.org/uniprot/Q42689 Q42689]
+
−
** [http://www.uniprot.org/uniprot/O22504 O22504]
+
−
** [http://www.uniprot.org/uniprot/O22505 O22505]
+
−
** [http://www.uniprot.org/uniprot/O22506 O22506]
+
−
** [http://www.uniprot.org/uniprot/Q59972 Q59972]
+
−
** [http://www.uniprot.org/uniprot/Q9UWN1 Q9UWN1]
+
−
** [http://www.uniprot.org/uniprot/Q9RDW7 Q9RDW7]
+
−
** [http://www.uniprot.org/uniprot/P43386 P43386]
+
−
** [http://www.uniprot.org/uniprot/P0A040 P0A040]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-6.3.1.2}}
+
−
{{#set: common name=type I glutamate--ammonia ligase}}
+
−
{{#set: gene associated=CHC_T00010135001_1|CHC_T00005451001_1|CHC_T00005454001_1}}
+
−
{{#set: in pathway=GLNSYN-PWY|PWY-5675|PWY-381|PWY-6549|PWY-6964|PWY490-3|PWY-6963}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+

Latest revision as of 16:59, 9 January 2019

Pathway PWY-5537

  • common name:
    • pyruvate fermentation to acetate V
  • taxonomic range:
  • Synonym(s):
    • acetate fermentation
    • acetate:succinate CoA transferase/SCoAS cycle
    • ASCT cycle

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5537&oldid=21083"