Difference between revisions of "RXN-16558"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1961 RXN-1961] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA(Ile)-lysidine synthase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1961 RXN-1961] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16558 RXN-16558] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** tRNA(Ile)-lysidine synthase
 
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/6.3.4.19 EC-6.3.4.19]
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[Cytidine-34-tRNAIle2]][c] '''=>''' 1 [[Lysidine-tRNA-Ile2]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PPI]][c]
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** 1 [[CPD-17813]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-17814]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 ATP[c] '''+''' 1 L-lysine[c] '''+''' 1 a cytidine34 in tRNAIle2[c] '''=>''' 1 a lysidine34 in tRNAIle2[c] '''+''' 1 AMP[c] '''+''' 2 H+[c] '''+''' 1 diphosphate[c]
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** 1 (2E,11Z)-hexadec-2,11-dienoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (11Z)-(S)-3-hydroxyhexadec-11-enoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_1130]]
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* Gene: [[CHC_T00009422001_1]]
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** ORIGINAL_GENOME
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** Source: [[orthology-galdieria.sulphuraria]]
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***AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009190001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009110001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009349001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
 +
** '''4''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
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* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[original_genome]]
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*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R09597 R09597]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=tRNA(Ile)-lysidine synthase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: ec number=EC-6.3.4.19}}
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{{#set: gene associated=CHC_T00009422001_1|CHC_T00009190001_1|CHC_T00009110001_1|CHC_T00009349001_1}}
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{{#set: gene associated=CHC_1130}}
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{{#set: in pathway=PWY-7656}}
−
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 16:08, 9 January 2019

Reaction RXN-16558

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,11Z)-hexadec-2,11-dienoyl-CoA[c] + 1 H2O[c] => 1 (11Z)-(S)-3-hydroxyhexadec-11-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 4 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-16558&oldid=21308"