Difference between revisions of "LL-DIAMINOPIMELATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] == * direction: ** REVERSIBLE * common name: ** glycerol kinase...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LL-DIAMINOPIMELATE LL-DIAMINOPIMELATE] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O
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* molecular weight:
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** 190.199   
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* inchi key:
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** InChIKey=GMKMEZVLHJARHF-WHFBIAKZSA-N
 
* common name:
 
* common name:
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** glycerol kinase
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** L,L-diaminopimelate
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.30 EC-2.7.1.30]
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* Synonym(s):
 
* Synonym(s):
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** L,L-A2pm
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** L,L-DAP
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** L,L-2,6-diaminopimelate
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** L,L-2,6-diaminoheptanedioate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[GLYCEROL]][c] '''<=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[DIAMINOPIMEPIM-RXN]]
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** 1 ATP[c] '''+''' 1 glycerol[c] '''<=>''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* [[RXN-7737]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008744001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008744001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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== Pathways  ==
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* [[PWY-4261]], glycerol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* METABOLIGHTS : MTBLC57609
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21644 21644]
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* BIGG : 26dap_LL
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* LIGAND-RXN:
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* CAS : 583-93-7
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** [http://www.genome.jp/dbget-bin/www_bget?R00847 R00847]
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* CAS : 14289-34-0
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* UNIPROT:
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* HMDB : HMDB01370
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** [http://www.uniprot.org/uniprot/P18157 P18157]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P47284 P47284]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57609 57609]
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** [http://www.uniprot.org/uniprot/Q9CG64 Q9CG64]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9V207 Q9V207]
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** [http://www.genome.jp/dbget-bin/www_bget?C00666 C00666]
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** [http://www.uniprot.org/uniprot/P44400 P44400]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q9WX53 Q9WX53]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1549100 1549100]
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** [http://www.uniprot.org/uniprot/Q7M0X5 Q7M0X5]
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{{#set: smiles=C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O}}
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** [http://www.uniprot.org/uniprot/P0A6F3 P0A6F3]
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{{#set: molecular weight=190.199    }}
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** [http://www.uniprot.org/uniprot/P25013 P25013]
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{{#set: inchi key=InChIKey=GMKMEZVLHJARHF-WHFBIAKZSA-N}}
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** [http://www.uniprot.org/uniprot/P19255 P19255]
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{{#set: common name=L,L-diaminopimelate}}
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** [http://www.uniprot.org/uniprot/P32190 P32190]
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{{#set: common name=L,L-A2pm|L,L-DAP|L,L-2,6-diaminopimelate|L,L-2,6-diaminoheptanedioate}}
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** [http://www.uniprot.org/uniprot/P32189 P32189]
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{{#set: reversible reaction associated=DIAMINOPIMEPIM-RXN|RXN-7737}}
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** [http://www.uniprot.org/uniprot/P95907 P95907]
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** [http://www.uniprot.org/uniprot/Q49011 Q49011]
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** [http://www.uniprot.org/uniprot/O93623 O93623]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=glycerol kinase}}
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{{#set: ec number=EC-2.7.1.30}}
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{{#set: gene associated=CHC_T00008744001|CHC_T00008744001_1}}
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{{#set: in pathway=PWY-4261}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:08, 9 January 2019

Metabolite LL-DIAMINOPIMELATE

  • smiles:
    • C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O
  • molecular weight:
    • 190.199
  • inchi key:
    • InChIKey=GMKMEZVLHJARHF-WHFBIAKZSA-N
  • common name:
    • L,L-diaminopimelate
  • Synonym(s):
    • L,L-A2pm
    • L,L-DAP
    • L,L-2,6-diaminopimelate
    • L,L-2,6-diaminoheptanedioate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • METABOLIGHTS : MTBLC57609
  • BIGG : 26dap_LL
  • CAS : 583-93-7
  • CAS : 14289-34-0
  • HMDB : HMDB01370
  • CHEBI:
  • LIGAND-CPD:
  • PUBCHEM:
"C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O" cannot be used as a page name in this wiki.



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