Difference between revisions of "HOMOSER-METSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** L-methionine biosynthesis I
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
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** L-methionine biosynthesis from L-homoserine
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** L-methionine biosynthesis by transsulfuration
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''7''' reactions in the full pathway
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** 2 [[FERROCYTOCHROME-B5]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[EPISTEROL]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[CPD-700]][c]
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* [[HOMOCYSMET-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 2 a ferrocytochrome b5[c] '''+''' 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 episterol[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 2 H2O[c] '''+''' 1 ergosta-5,7,24(28)-trien-3β-ol[c]
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*** [[CHC_T00009326001_1]]
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*** [[CHC_T00009326001]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00005524001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[CHC_T00006481001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY-6075]], ergosterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6075 PWY-6075]
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* [[HOMOCYSMETB12-RXN]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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** 1 associated gene(s):
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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*** [[CHC_T00005524001_1]]
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** '''7''' reactions found over '''36''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[orthology]]:
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* [[HOMSUCTRAN-RXN]]
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** [[pantograph]]:
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** 0 associated gene:
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*** [[galdieria.sulphuraria]]
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** 1 reconstruction source(s) associated:
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*** [[a.taliana]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[O-SUCCHOMOSERLYASE-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00008547001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-15131]]
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** 1 associated gene(s):
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*** [[CHC_T00008829001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15124 RXN-15124]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15127 RXN-15127]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33463 33463]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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* LIGAND-RXN:
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{{#set: common name=L-methionine biosynthesis I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07505 R07505]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07491 R07491]
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{{#set: common name=L-methionine biosynthesis from L-homoserine|L-methionine biosynthesis by transsulfuration}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=5}}
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{{#set: ec number=EC-1.14.19.20}}
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{{#set: total reaction=7}}
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{{#set: gene associated=CHC_T00006481001_1}}
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{{#set: completion rate=71.0}}
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{{#set: in pathway=PWY-6075|PWY-2541}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Latest revision as of 17:08, 9 January 2019

Pathway HOMOSER-METSYN-PWY

  • common name:
    • L-methionine biosynthesis I
  • taxonomic range:
  • Synonym(s):
    • L-methionine biosynthesis from L-homoserine
    • L-methionine biosynthesis by transsulfuration

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=HOMOSER-METSYN-PWY&oldid=21317"