Difference between revisions of "CHC T00010056001 1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8616 RXN-8616] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/4....")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8616 RXN-8616] ==
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== Gene CHC_T00010056001_1 ==
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* direction:
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** LEFT-TO-RIGHT
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.3.48 EC-4.2.3.48]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ASPCARBTRANS-RXN]]
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** 1 [[FARNESYL-PP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-12568]][c]
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** Source: [[orthology-galdieria.sulphuraria]]
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* With common name(s):
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* Reaction: [[CARBPSYN-RXN]]
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** 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 diphosphate[c] '''+''' 1 (3S,6E)-nerolidol[c]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Genes associated with this reaction  ==
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* Reaction: [[DIHYDROOROT-RXN]]
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== Pathways ==
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[PWY-5434]], (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5434 PWY-5434]
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* Reaction: [[GLUTAMIN-RXN]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** Source: [[orthology-galdieria.sulphuraria]]
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== Reconstruction information  ==
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** Source: [[orthology-ectocarpus_siliculosus]]
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* [[gap-filling]]:
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* Reaction: [[RXN-13202]]
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** [[meneco]]:
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** Source: [[orthology-galdieria.sulphuraria]]
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*** [[added for gapfilling]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[RXN-14196]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[RXN-16909]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[RXN-16910]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways associated ==
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* [[PWY-7400]]
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* [[PWY-5686]]
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* [[GLUTAMINDEG-PWY]]
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* [[CITRULBIO-PWY]]
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* [[PWY-7790]]
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* [[PWY-4984]]
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* [[PWY-5154]]
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* [[PWY-7693]]
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* [[ARGSYNBSUB-PWY]]
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* [[ARGSYN-PWY]]
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* [[PWY-7791]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=ASPCARBTRANS-RXN|CARBPSYN-RXN|DIHYDROOROT-RXN|GLUTAMIN-RXN|RXN-13202|RXN-14196|RXN-16909|RXN-16910}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27530 27530]
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{{#set: pathway associated=PWY-7400|PWY-5686|GLUTAMINDEG-PWY|CITRULBIO-PWY|PWY-7790|PWY-4984|PWY-5154|PWY-7693|ARGSYNBSUB-PWY|ARGSYN-PWY|PWY-7791}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R08374 R08374]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.2.3.48}}
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{{#set: in pathway=PWY-5434}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction source=added for gapfilling}}
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Latest revision as of 16:13, 9 January 2019

Gene CHC_T00010056001_1

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00010056001_1&oldid=21429"