Difference between revisions of "ASPARAGHYD-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE] == * smiles: *...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] ==
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* smiles:
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* direction:
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** CC(C)C(C([O-])=O)C(C([O-])=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=RNQHMTFBUSSBJQ-CRCLSJGQSA-L
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** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
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* common name:
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** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1]
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** (2R,3S)-3-isopropylmalate
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* molecular weight:
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** 174.153   
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* Synonym(s):
 
* Synonym(s):
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** 2-D-threo-hydroxy-3-carboxy-isocaproate
 
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** 3-carboxy-2-hydroxy-4-methylpentanoate
 
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** β-isopropylmalate
 
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** 3-isopropylmalate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-13158]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[ASN]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ASPARTATE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-8991]]
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** 1 H2O[c] '''+''' 1 L-asparagine[c] '''=>''' 1 ammonium[c] '''+''' 1 L-aspartate[c]
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* [[RXN-13163]]
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* [[3-ISOPROPYLMALDEHYDROG-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00002545001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00000306001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00001474001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00002449001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6857402 6857402]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21016 21016]
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* HMDB : HMDB12156
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P06608 P06608]
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** [http://www.genome.jp/dbget-bin/www_bget?C04411 C04411]
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** [http://www.uniprot.org/uniprot/P26900 P26900]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P43843 P43843]
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** [http://www.chemspider.com/Chemical-Structure.5256741.html 5256741]
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** [http://www.uniprot.org/uniprot/Q9V262 Q9V262]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9JT73 Q9JT73]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=35121 35121]
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** [http://www.uniprot.org/uniprot/O25424 O25424]
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* BIGG : 3c2hmp
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** [http://www.uniprot.org/uniprot/P37595 P37595]
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{{#set: smiles=CC(C)C(C([O-])=O)C(C([O-])=O)O}}
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** [http://www.uniprot.org/uniprot/Q9ZLB9 Q9ZLB9]
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{{#set: inchi key=InChIKey=RNQHMTFBUSSBJQ-CRCLSJGQSA-L}}
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** [http://www.uniprot.org/uniprot/O34482 O34482]
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{{#set: common name=(2R,3S)-3-isopropylmalate}}
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** [http://www.uniprot.org/uniprot/Q9V2K1 Q9V2K1]
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{{#set: molecular weight=174.153    }}
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** [http://www.uniprot.org/uniprot/O57797 O57797]
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{{#set: common name=2-D-threo-hydroxy-3-carboxy-isocaproate|3-carboxy-2-hydroxy-4-methylpentanoate|β-isopropylmalate|3-isopropylmalate}}
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** [http://www.uniprot.org/uniprot/Q9PJ82 Q9PJ82]
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{{#set: consumed by=RXN-13158}}
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** [http://www.uniprot.org/uniprot/P30363 P30363]
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{{#set: consumed or produced by=RXN-8991|RXN-13163|3-ISOPROPYLMALDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/P30362 P30362]
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** [http://www.uniprot.org/uniprot/P30364 P30364]
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** [http://www.uniprot.org/uniprot/P38986 P38986]
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** [http://www.uniprot.org/uniprot/P50287 P50287]
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** [http://www.uniprot.org/uniprot/P11163 P11163]
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** [http://www.uniprot.org/uniprot/P50286 P50286]
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** [http://www.uniprot.org/uniprot/P87015 P87015]
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** [http://www.uniprot.org/uniprot/Q9UTS7 Q9UTS7]
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** [http://www.uniprot.org/uniprot/P00805 P00805]
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** [http://www.uniprot.org/uniprot/P0A962 P0A962]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.1.38}}
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{{#set: ec number=EC-3.5.1.1}}
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{{#set: gene associated=CHC_T00002545001_1|CHC_T00000306001_1|CHC_T00001474001_1|CHC_T00002449001_1}}
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{{#set: in pathway=ASPARAGINE-DEG1-PWY-1|ASPASN-PWY|ASPARAGINE-DEG1-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 17:13, 9 January 2019

Reaction ASPARAGHYD-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-asparagine[c] => 1 ammonium[c] + 1 L-aspartate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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