Difference between revisions of "DAPASYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAPASYN-RXN DAPASYN-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.7.3 EC-1.3.7.3]
+
** [http://enzyme.expasy.org/EC/2.6.1.62 EC-2.6.1.62]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[1516-DIHYDROBILIVERDIN]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[3Z-PHYCOERYTHROBILIN]][c]
+
** 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c] '''+''' 1 [[DIAMINONONANOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 15,16-dihydrobiliverdin[c] '''+''' 2 H+[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (3Z)-phycoerythrobilin[c]
+
** 1 8-amino-7-oxononanoate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''<=>''' 1 S-adenosyl-4-methylthio-2-oxobutanoate[c] '''+''' 1 7,8-diaminopelargonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00003760001_1]]
+
* Gene: [[CHC_T00002287001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
+
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16861 16861]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q58696 Q58696]
 +
** [http://www.uniprot.org/uniprot/P53555 P53555]
 +
** [http://www.uniprot.org/uniprot/P44426 P44426]
 +
** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
 +
** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
 +
** [http://www.uniprot.org/uniprot/P46395 P46395]
 +
** [http://www.uniprot.org/uniprot/P53656 P53656]
 +
** [http://www.uniprot.org/uniprot/P22805 P22805]
 +
** [http://www.uniprot.org/uniprot/P45488 P45488]
 +
** [http://www.uniprot.org/uniprot/P12995 P12995]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05819 R05819]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-1.3.7.3}}
+
{{#set: ec number=EC-2.6.1.62}}
−
{{#set: gene associated=CHC_T00003760001_1}}
+
{{#set: gene associated=CHC_T00002287001_1}}
−
{{#set: in pathway=PWY-7579|PWY-5915}}
+
{{#set: in pathway=PWY0-1507}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Latest revision as of 17:14, 9 January 2019

Reaction DAPASYN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=DAPASYN-RXN&oldid=21470"