Difference between revisions of "SULFATE-ADENYLYLTRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENDECARBOX-RXN UROGENDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enz...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENDECARBOX-RXN UROGENDECARBOX-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37]
+
** [http://enzyme.expasy.org/EC/2.7.7.4 EC-2.7.7.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 4 [[PROTON]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 4 [[CARBON-DIOXIDE]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[APS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 4 H+[c] '''+''' 1 uroporphyrinogen-III[c] '''=>''' 1 coproporphyrinogen III[c] '''+''' 4 CO2[c]
+
** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 sulfate[c] '''<=>''' 1 diphosphate[c] '''+''' 1 adenosine 5'-phosphosulfate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008531001_1]]
+
* Gene: [[CHC_T00008316001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008927001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
+
* [[DISSULFRED-PWY]], sulfate reduction IV (dissimilatory, to hydrogen sufide)): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
+
* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
+
* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7766]], heme biosynthesis IV (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7766 PWY-7766]
+
* [[PWY-6683]], sulfate reduction III (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
+
* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
+
* [[P224-PWY]], sulfate reduction V (dissimilatory, to thiosulfate): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
+
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19865 19865]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18133 18133]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R03197 R03197]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P06132 P06132]
+
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
−
** [http://www.uniprot.org/uniprot/P16891 P16891]
+
** [http://www.uniprot.org/uniprot/O33581 O33581]
−
** [http://www.uniprot.org/uniprot/P32395 P32395]
+
** [http://www.uniprot.org/uniprot/O34764 O34764]
−
** [http://www.uniprot.org/uniprot/Q9PN54 Q9PN54]
+
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
−
** [http://www.uniprot.org/uniprot/Q9JV52 Q9JV52]
+
** [http://www.uniprot.org/uniprot/O67174 O67174]
−
** [http://www.uniprot.org/uniprot/P29680 P29680]
+
** [http://www.uniprot.org/uniprot/P21156 P21156]
−
** [http://www.uniprot.org/uniprot/P32347 P32347]
+
** [http://www.uniprot.org/uniprot/O23324 O23324]
−
** [http://www.uniprot.org/uniprot/P32920 P32920]
+
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
−
** [http://www.uniprot.org/uniprot/P54224 P54224]
+
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
−
** [http://www.uniprot.org/uniprot/O81220 O81220]
+
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
−
** [http://www.uniprot.org/uniprot/P70697 P70697]
+
** [http://www.uniprot.org/uniprot/P28604 P28604]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
−
{{#set: ec number=EC-4.1.1.37}}
+
** [http://www.uniprot.org/uniprot/P23845 P23845]
−
{{#set: gene associated=CHC_T00008531001_1}}
+
** [http://www.uniprot.org/uniprot/O43252 O43252]
−
{{#set: in pathway=HEMESYN2-PWY|PWY0-1415|PWY-7159|PWY-7766|CHLOROPHYLL-SYN|HEME-BIOSYNTHESIS-II|PWY-5531}}
+
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 +
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 +
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 +
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 +
** [http://www.uniprot.org/uniprot/P08536 P08536]
 +
** [http://www.uniprot.org/uniprot/P74241 P74241]
 +
** [http://www.uniprot.org/uniprot/O48888 O48888]
 +
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 +
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 +
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 +
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 +
** [http://www.uniprot.org/uniprot/P13441 P13441]
 +
** [http://www.uniprot.org/uniprot/P13442 P13442]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.7.7.4}}
 +
{{#set: gene associated=CHC_T00008316001_1|CHC_T00008927001_1}}
 +
{{#set: in pathway=DISSULFRED-PWY|PWY-5278|PWY-5340|PWY-6683|SULFMETII-PWY|P224-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 17:17, 9 January 2019

Reaction SULFATE-ADENYLYLTRANS-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 H+[c] + 1 sulfate[c] <=> 1 diphosphate[c] + 1 adenosine 5'-phosphosulfate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • DISSULFRED-PWY, sulfate reduction IV (dissimilatory, to hydrogen sufide)): DISSULFRED-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5278, sulfite oxidation III: PWY-5278
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5340, sulfate activation for sulfonation: PWY-5340
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6683, sulfate reduction III (assimilatory): PWY-6683
    • 2 reactions found over 3 reactions in the full pathway
  • SULFMETII-PWY, sulfate reduction II (assimilatory): SULFMETII-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • P224-PWY, sulfate reduction V (dissimilatory, to thiosulfate): P224-PWY
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=SULFATE-ADENYLYLTRANS-RXN&oldid=21533"