Difference between revisions of "CHLOROPHYLL-SYN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1223 RXN-1223] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1223 RXN-1223] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/3.13.1.1 EC-3.13.1.1]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* Synonym(s):
 
* Synonym(s):
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** light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''9''' reactions in the full pathway
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** 1 [[SO3]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP-SULFOQUINOVOSE]][c] '''+''' 1 [[WATER]][c]
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* [[PROTOPORGENOXI-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 sulfite[c] '''+''' 1 H+[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP-α-D-sulfoquinovopyranose[c] '''+''' 1 H2O[c]
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*** [[CHC_T00000813001_1]]
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*** [[CHC_T00001062001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00004880001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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** 3 reconstruction source(s) associated:
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* [[CHC_T00009188001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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** [[pantograph]]-[[a.taliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[RXN-5282]]
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* [[PWYQT-4427]], sulfoquinovosyl diacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4427 PWYQT-4427]
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** 1 associated gene(s):
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[CHC_670]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[annotation-original_genome]]
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** [[pantograph]]:
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* [[RXN-5283]]
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*** [[galdieria.sulphuraria]]
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** 1 associated gene(s):
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*** [[a.taliana]]
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*** [[CHC_670]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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* [[RXN-5284]]
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** 1 associated gene(s):
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*** [[CHC_670]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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* [[RXN-5285]]
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** 3 associated gene(s):
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*** [[CHC_T00009425001]]
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*** [[CHC_T00009425001_1]]
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*** [[CHC_T00010090001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN0-1461]]
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** 3 associated gene(s):
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*** [[CHC_T00003096001_1]]
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*** [[CHC_T00002160001_1]]
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*** [[CHC_T00008857001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN1F-20]]
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** 5 associated gene(s):
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*** [[CHC_T00008422001]]
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*** [[CHC_T00008032001_1]]
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*** [[CHC_T00000990001_1]]
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*** [[CHC_T00008429001_1]]
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*** [[CHC_T00008422001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[UROGENDECARBOX-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00008531001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13197 13197]
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{{#set: taxonomic range=TAX-2763}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05775 R05775]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-3.13.1.1}}
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{{#set: common name=light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I}}
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{{#set: gene associated=CHC_T00009188001_1}}
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{{#set: reaction found=9}}
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{{#set: in pathway=PWYQT-4427}}
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{{#set: total reaction=9}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Latest revision as of 17:18, 9 January 2019

Pathway CHLOROPHYLL-SYN

  • common name:
    • 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
  • taxonomic range:
  • Synonym(s):
    • light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHLOROPHYLL-SYN&oldid=21562"