Difference between revisions of "FASYN-INITIAL-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** superpathway of fatty acid biosynthesis initiation (E. coli)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-33084]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''8''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CPD0-2352]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[CPD0-2353]][c]
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* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c] '''=>''' 1 a tRNA fragment[c] '''+''' 1 a tRNA precursor with a short 3' extension[c]
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*** [[CHC_T00009465001]]
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*** [[CHC_T00009465001_1]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00004542001_1]]
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*** [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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* [[ACP-S-ACETYLTRANSFER-RXN]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[CHC_T00009465001_1]]
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* [[orthology]]:
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** 2 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY-4381]]
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** 0 associated gene:
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* [[PWY-5965]]
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** 0 associated gene:
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* [[PWY-5966]]
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** 0 associated gene:
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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* ECOCYC:
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** [http://www.uniprot.org/uniprot/Q02773 Q02773]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
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** [http://www.uniprot.org/uniprot/P41812 P41812]
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{{#set: common name=superpathway of fatty acid biosynthesis initiation (E. coli)}}
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** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
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{{#set: taxonomic range=TAX-33084}}
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** [http://www.uniprot.org/uniprot/P48206 P48206]
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/P29433 P29433]
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/P25817 P25817]
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{{#set: completion rate=62.0}}
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** [http://www.uniprot.org/uniprot/P22835 P22835]
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** [http://www.uniprot.org/uniprot/P25814 P25814]
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** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
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** [http://www.uniprot.org/uniprot/Q55005 Q55005]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.1.26.5}}
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{{#set: gene associated=CHC_T00004542001_1}}
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{{#set: in pathway=PWY0-1479}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 17:20, 9 January 2019

Pathway FASYN-INITIAL-PWY

Reaction(s) found

5 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links





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