Difference between revisions of "CPD1F-114"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-114 CPD1F-114] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C
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* molecular weight:
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** 536.882   
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* inchi key:
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** InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N
 
* common name:
 
* common name:
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** glutamate-1-semialdehyde 2,1-aminomutase
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** all-trans-lycopene
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
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* Synonym(s):
 
* Synonym(s):
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** ψ,ψ-carotene
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN1F-150]]
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** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
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* [[RXN1F-147]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
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* [[RXN-8042]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[RXN-12414]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008868001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00008868001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* METABOLIGHTS : MTBLC15948
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C05432 C05432]
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** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
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* HMDB : HMDB03000
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* UNIPROT:
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* LIPID_MAPS : LMPR01070257
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** [http://www.uniprot.org/uniprot/P18492 P18492]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P21267 P21267]
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** [http://www.chemspider.com/Chemical-Structure.394156.html 394156]
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** [http://www.uniprot.org/uniprot/Q06741 Q06741]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q06774 Q06774]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15948 15948]
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** [http://www.uniprot.org/uniprot/P23893 P23893]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/O26330 O26330]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=446925 446925]
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** [http://www.uniprot.org/uniprot/P30949 P30949]
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{{#set: smiles=CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C}}
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** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
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{{#set: molecular weight=536.882    }}
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** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
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{{#set: inchi key=InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N}}
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** [http://www.uniprot.org/uniprot/O29027 O29027]
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{{#set: common name=all-trans-lycopene}}
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** [http://www.uniprot.org/uniprot/P45621 P45621]
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{{#set: common name=ψ,ψ-carotene}}
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** [http://www.uniprot.org/uniprot/P24630 P24630]
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{{#set: consumed by=RXN1F-150|RXN1F-147}}
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** [http://www.uniprot.org/uniprot/P31593 P31593]
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{{#set: produced by=RXN-8042}}
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** [http://www.uniprot.org/uniprot/Q39566 Q39566]
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{{#set: reversible reaction associated=RXN-12414}}
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** [http://www.uniprot.org/uniprot/P48247 P48247]
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** [http://www.uniprot.org/uniprot/P46716 P46716]
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** [http://www.uniprot.org/uniprot/Q40147 Q40147]
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** [http://www.uniprot.org/uniprot/O74061 O74061]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamate-1-semialdehyde 2,1-aminomutase}}
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{{#set: ec number=EC-5.4.3.8}}
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{{#set: gene associated=CHC_T00008868001_1|CHC_T00008868001}}
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{{#set: in pathway=PWY-5188}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:23, 9 January 2019

Metabolite CPD1F-114

  • smiles:
    • CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C
  • molecular weight:
    • 536.882
  • inchi key:
    • InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N
  • common name:
    • all-trans-lycopene
  • Synonym(s):
    • ψ,ψ-carotene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • METABOLIGHTS : MTBLC15948
  • LIGAND-CPD:
  • HMDB : HMDB03000
  • LIPID_MAPS : LMPR01070257
  • CHEMSPIDER:
  • CHEBI:
  • PUBCHEM:





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