Difference between revisions of "PWY-6808"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** dTDP-D-forosamine biosynthesis
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
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** D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
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** TDP-D-forosamine biosynthesis
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** β-hydroxypalmitoyl-acyl carrier protein dehydrase
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** β-hydroxypalmitoyl thioester dehydratase
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** β-hydroxypalmityl-ACP dehydrase
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** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
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** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''9''' reactions in the full pathway
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** 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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* [[DTDPGLUCDEHYDRAT-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 a (3R)-3-hydroxypalmitoyl-[acp][c] '''=>''' 1 a trans hexadecenoyl-[acp][c] '''+''' 1 H2O[c]
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*** [[CHC_T00009237001_1]]
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*** [[CHC_T00009237001]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00008950001_1]]
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== Pathways  ==
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*** [[CHC_T00008912001_1]]
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** 4 reconstruction source(s) associated:
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** '''31''' reactions found over '''31''' reactions in the full pathway
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*** [[orthology-galdieria.sulphuraria]]
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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*** [[annotation-original_genome]]
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** '''22''' reactions found over '''31''' reactions in the full pathway
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*** [[orthology-arabidopsis_thaliana]]
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== Reconstruction information  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[gap-filling]]:
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== Reaction(s) not found ==
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** [[meneco]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN]
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*** [[added for gapfilling]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12404 RXN-12404]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12406 RXN-12406]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12407 RXN-12407]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12408 RXN-12408]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12409 RXN-12409]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12943 RXN-12943]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16262 RXN-16262]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-MAP:
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** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462]
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** [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
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* UNIPROT:
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{{#set: common name=dTDP-D-forosamine biosynthesis}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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{{#set: taxonomic range=TAX-201174}}
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** [http://www.uniprot.org/uniprot/P07149 P07149]
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{{#set: common name=TDP-D-forosamine biosynthesis}}
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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{{#set: total reaction=9}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=11.0}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: common name=D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|β-hydroxypalmitoyl-acyl carrier protein dehydrase|β-hydroxypalmitoyl thioester dehydratase|β-hydroxypalmityl-ACP dehydrase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction source=added for gapfilling}}
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Latest revision as of 17:23, 9 January 2019

Pathway PWY-6808

  • common name:
    • dTDP-D-forosamine biosynthesis
  • taxonomic range:
  • Synonym(s):
    • TDP-D-forosamine biosynthesis

Reaction(s) found

1 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6808&oldid=21675"