Difference between revisions of "PWY-7003"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16614 RXN-16614] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16614 RXN-16614] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003] ==
* direction:
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* common name:
** LEFT-TO-RIGHT
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** glycerol degradation to butanol
* ec number:
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* taxonomic range:
** [http://enzyme.expasy.org/EC/5.3.3.14 EC-5.3.3.14]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''8''' reactions found over '''10''' reactions in the full pathway
** 1 [[Dodec-2-enoyl-ACPs]][c] '''=>''' 1 [[3Z-dodec-3-enoyl-ACPs]][c]
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* [[2PGADEHYDRAT-RXN]]
* With common name(s):
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** 5 associated gene(s):
** 1 a (2E)-dodec-2-enoyl-[acp][c] '''=>''' 1 a (3Z)-dodec-3-enoyl-[acp][c]
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*** [[CHC_T00008696001]]
 
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*** [[CHC_T00008696001_1]]
== Genes associated with this reaction  ==
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*** [[CHC_T00009127001_1]]
== Pathways  ==
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*** [[CHC_T00008490001]]
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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*** [[CHC_T00009127001]]
** '''14''' reactions found over '''14''' reactions in the full pathway
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** 4 reconstruction source(s) associated:
== Reconstruction information  ==
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*** [[orthology-galdieria.sulphuraria]]
* [[gap-filling]]:
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*** [[annotation-original_genome]]
** [[meneco]]:
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*** [[orthology-arabidopsis_thaliana]]
*** [[added for gapfilling]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[3PGAREARR-RXN]]
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** 6 associated gene(s):
 +
*** [[CHC_T00001519001_1]]
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*** [[CHC_T00004490001_1]]
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*** [[CHC_T00004201001_1]]
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*** [[CHC_T00007707001_1]]
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*** [[CHC_T00000449001_1]]
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*** [[CHC_T00001241001_1]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 2 associated gene(s):
 +
*** [[CHC_T00009438001_1]]
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*** [[CHC_T00009523001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PEPDEPHOS-RXN]]
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** 6 associated gene(s):
 +
*** [[CHC_T00008530001]]
 +
*** [[CHC_T00008652001]]
 +
*** [[CHC_T00008652001_1]]
 +
*** [[CHC_T00008482001_1]]
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*** [[CHC_T00008482001]]
 +
*** [[CHC_T00008530001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PHOSGLYPHOS-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00004105001_1]]
 +
*** [[CHC_T00009179001]]
 +
*** [[CHC_T00009179001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY-6131]]
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** 0 associated gene:
 +
* [[PWY-6583]]
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** 0 associated gene:
 +
* [[TRIOSEPISOMERIZATION-RXN]]
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** 5 associated gene(s):
 +
*** [[CHC_T00009126001_1]]
 +
*** [[CHC_T00009523001_1]]
 +
*** [[CHC_T00009126001]]
 +
*** [[CHC_T00009545001]]
 +
*** [[CHC_T00009545001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glycerol degradation to butanol}}
{{#set: ec number=EC-5.3.3.14}}
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{{#set: taxonomic range=TAX-2}}
{{#set: in pathway=PWY-7664}}
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{{#set: reaction found=8}}
{{#set: reconstruction category=gap-filling}}
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{{#set: total reaction=10}}
{{#set: reconstruction tool=meneco}}
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{{#set: completion rate=80.0}}
{{#set: reconstruction source=added for gapfilling}}
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Latest revision as of 17:26, 9 January 2019

Pathway PWY-7003

  • common name:
    • glycerol degradation to butanol
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

8 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links