Difference between revisions of "ALPHAGALACTOSID-RXN"

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(Created page with "Category:Gene == Gene CHC_T00008363001 == * left end position: ** 360156 * transcription direction: ** NEGATIVE * right end position: ** 364472 * centisome position: ** 86...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008363001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] ==
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* left end position:
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* direction:
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** 360156
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** alpha-galactosidase
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* right end position:
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* ec number:
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** 364472
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** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22]
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* centisome position:
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** 86.32550   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PROTEIN-KINASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[WATER]][c] '''+''' 1 [[MELIBIOSE]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 melibiose[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 D-glucopyranose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008497001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008413001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008780001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008413001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY0-1301]], melibiose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1301 PWY0-1301]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=360156}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
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{{#set: right end position=364472}}
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* UNIPROT:
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{{#set: centisome position=86.32550    }}
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** [http://www.uniprot.org/uniprot/P16551 P16551]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P27756 P27756]
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** [http://www.uniprot.org/uniprot/P04824 P04824]
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** [http://www.uniprot.org/uniprot/P06720 P06720]
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** [http://www.uniprot.org/uniprot/P06280 P06280]
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** [http://www.uniprot.org/uniprot/P51569 P51569]
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** [http://www.uniprot.org/uniprot/O93816 O93816]
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** [http://www.uniprot.org/uniprot/Q03647 Q03647]
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** [http://www.uniprot.org/uniprot/P14749 P14749]
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** [http://www.uniprot.org/uniprot/P28351 P28351]
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** [http://www.uniprot.org/uniprot/P43467 P43467]
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** [http://www.uniprot.org/uniprot/Q99172 Q99172]
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** [http://www.uniprot.org/uniprot/P41945 P41945]
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** [http://www.uniprot.org/uniprot/P41946 P41946]
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** [http://www.uniprot.org/uniprot/P41947 P41947]
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** [http://www.uniprot.org/uniprot/Q92457 Q92457]
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** [http://www.uniprot.org/uniprot/Q92456 Q92456]
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** [http://www.uniprot.org/uniprot/Q92451 Q92451]
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** [http://www.uniprot.org/uniprot/O04943 O04943]
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** [http://www.uniprot.org/uniprot/O04944 O04944]
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** [http://www.uniprot.org/uniprot/Q39811 Q39811]
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** [http://www.uniprot.org/uniprot/Q41100 Q41100]
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** [http://www.uniprot.org/uniprot/Q42656 Q42656]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=alpha-galactosidase}}
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{{#set: ec number=EC-3.2.1.22}}
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{{#set: gene associated=CHC_T00008497001_1|CHC_T00008413001|CHC_T00008780001_1|CHC_T00008413001_1}}
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{{#set: in pathway=PWY0-1301}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:27, 9 January 2019

Reaction ALPHAGALACTOSID-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • alpha-galactosidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1301, melibiose degradation: PWY0-1301
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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