Difference between revisions of "DIPHTINE--AMMONIA-LIGASE-RXN"

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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://enzyme.expasy.org/EC/6.3.1.14 EC-6.3.1.14]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** L-arginine degradation I (arginase pathway)
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* Synonym(s):
 
* Synonym(s):
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** L-arginase degradative pathway
 
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** L-glutamate biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[ARGINASE-RXN]]
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** 1 [[DIPHTINE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[DIPHTHAMIDE]][c]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 a diphthine-[translation elongation factor 2][c] '''+''' 1 ammonium[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 a diphthamide-[translation elongation factor 2][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008649001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-7546]], diphthamide biosynthesis (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7546 PWY-7546]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6482]], diphthamide biosynthesis (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6482 PWY-6482]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3193}}
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* RHEA:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19753 19753]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
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{{#set: common name=L-arginine degradation I (arginase pathway)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-arginase degradative pathway|L-glutamate biosynthesis}}
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{{#set: ec number=EC-6.3.1.14}}
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{{#set: reaction found=2}}
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{{#set: gene associated=CHC_T00008649001_1}}
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{{#set: reaction not found=3}}
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{{#set: in pathway=PWY-7546|PWY-6482}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:29, 9 January 2019

Reaction DIPHTINE--AMMONIA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a diphthine-[translation elongation factor 2][c] + 1 ammonium[c] + 1 ATP[c] => 1 H+[c] + 1 AMP[c] + 1 diphosphate[c] + 1 a diphthamide-[translation elongation factor 2][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7546, diphthamide biosynthesis (eukaryotes): PWY-7546
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6482, diphthamide biosynthesis (archaea): PWY-6482
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=DIPHTINE--AMMONIA-LIGASE-RXN&oldid=21804"