Difference between revisions of "GLUTAMIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** sporopollenin precursors biosynthesis
+
** ferredoxin-dependent glutamate synthase
 +
** carbamoyl phosphate synthase small subunit
 +
** GMP synthase (glutamine-hydrolysing)
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
 +
** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
−
** sporopollenin monomer biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''4''' reaction(s) found
+
* With identifiers:
−
** [[RXN-12184]]
+
** 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[AMMONIUM]][c]
−
** [[RXN-16389]]
+
* With common name(s):
−
** [[RXN-16401]]
+
** 1 H2O[c] '''+''' 1 L-glutamine[c] '''=>''' 1 L-glutamate[c] '''+''' 1 ammonium[c]
−
** [[RXN-16402]]
+
 
−
== Reaction(s) not found ==
+
== Genes associated with this reaction  ==
−
* '''14''' reaction(s) not found
+
Genes have been associated with this reaction based on different elements listed below.
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9666 RXN-9666]
+
* Gene: [[CHC_T00008596001_1]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16398 RXN-16398]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12186 RXN-12186]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN]
+
* Gene: [[CHC_T00000667001_1]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16399 RXN-16399]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9627 RXN-9627]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624]
+
* Gene: [[CHC_T00009427001]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16408 RXN-16408]
+
** Source: [[annotation-original_genome]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16405 RXN-16405]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16404 RXN-16404]
+
* Gene: [[CHC_1080]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16407 RXN-16407]
+
** Source: [[annotation-original_genome]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16406 RXN-16406]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16400 RXN-16400]
+
* Gene: [[CHC_T00007798001_1]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16403 RXN-16403]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00010056001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009427001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_70]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00002449001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00000298001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00004458001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
== Pathways  ==
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-3193}}
+
* RHEA:
−
{{#set: common name=sporopollenin precursors biosynthesis}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15889 15889]
−
{{#set: common name=sporopollenin monomer biosynthesis}}
+
* UNIPROT:
−
{{#set: reaction found=4}}
+
** [http://www.uniprot.org/uniprot/P10172 P10172]
−
{{#set: reaction not found=14}}
+
** [http://www.uniprot.org/uniprot/P28492 P28492]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ferredoxin-dependent glutamate synthase}}
 +
{{#set: common name=carbamoyl phosphate synthase small subunit}}
 +
{{#set: common name=GMP synthase (glutamine-hydrolysing)}}
 +
{{#set: ec number=EC-3.5.1.38}}
 +
{{#set: ec number=EC-3.5.1.2}}
 +
{{#set: gene associated=CHC_T00008596001_1|CHC_T00000667001_1|CHC_T00009427001|CHC_1080|CHC_T00007798001_1|CHC_T00010056001_1|CHC_T00009427001_1|CHC_70|CHC_T00002449001_1|CHC_T00000298001_1|CHC_T00004458001_1}}
 +
{{#set: in pathway=CITRULBIO-PWY|GLUTAMINDEG-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:29, 9 January 2019

Reaction GLUTAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-dependent glutamate synthase
    • carbamoyl phosphate synthase small subunit
    • GMP synthase (glutamine-hydrolysing)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-glutamine[c] => 1 L-glutamate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GLUTAMIN-RXN&oldid=21806"