Difference between revisions of "RXN-13673"

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(Created page with "Category:Gene == Gene CHC_T00008586001 == * left end position: ** 359872 * transcription direction: ** POSITIVE * right end position: ** 361162 * centisome position: ** 99...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008586001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13673 RXN-13673] ==
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* left end position:
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* direction:
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** 359872
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Glutathione S-transferase
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* right end position:
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** microsomal glutathione S-transferase
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** 361162
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.5.1.18 EC-2.5.1.18]
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** 99.13146   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[F16ALDOLASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[GLUTATHIONE]][c] '''+''' 1 [[CPD-10806]][c] '''=>''' 1 [[CPD-14704]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 glutathione[c] '''+''' 1 4-hydroxy-2-nonenal[c] '''=>''' 1 4-hydroxy-2-nonenal-glutathione conjugate[c]
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* [[PWY-1042]]
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* [[P341-PWY]]
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== Genes associated with this reaction  ==
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* [[GLUCONEO-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUCSYN-PWY]]
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* Gene: [[CHC_T00009312001_1]]
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* [[PWY-7385]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[GLYCOLYSIS]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* [[ANAGLYCOLYSIS-PWY]]
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* Gene: [[CHC_T00009287001_1]]
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* [[CALVIN-PWY]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[PWY-1861]]
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* Gene: [[CHC_T00009444001_1]]
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* [[PWY-6142]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[PWY-5484]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* [[P185-PWY]]
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* Gene: [[CHC_T00008274001_1]]
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* [[PWY66-399]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00006560001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00003419001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008425001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008791001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008331001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009312001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008791001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008810001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008274001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008810001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009444001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008766001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008724001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009287001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7112]], 4-hydroxy-2-nonenal detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=359872}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Glutathione S-transferase}}
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{{#set: right end position=361162}}
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{{#set: common name=microsomal glutathione S-transferase}}
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{{#set: centisome position=99.13146    }}
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{{#set: ec number=EC-2.5.1.18}}
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{{#set: reaction associated=F16ALDOLASE-RXN}}
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{{#set: gene associated=CHC_T00009312001_1|CHC_T00009287001_1|CHC_T00009444001_1|CHC_T00008274001_1|CHC_T00006560001_1|CHC_T00003419001_1|CHC_T00008425001|CHC_T00008791001|CHC_T00008331001|CHC_T00009312001|CHC_T00008791001_1|CHC_T00008810001|CHC_T00008274001|CHC_T00008810001_1|CHC_T00009444001|CHC_T00008766001|CHC_T00008724001|CHC_T00009287001}}
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{{#set: pathway associated=PWY-1042|P341-PWY|GLUCONEO-PWY|SUCSYN-PWY|PWY-7385|GLYCOLYSIS|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY-1861|PWY-6142|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: in pathway=PWY-7112}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:31, 9 January 2019

Reaction RXN-13673

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutathione S-transferase
    • microsomal glutathione S-transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 glutathione[c] + 1 4-hydroxy-2-nonenal[c] => 1 4-hydroxy-2-nonenal-glutathione conjugate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7112, 4-hydroxy-2-nonenal detoxification: PWY-7112
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13673&oldid=21869"