Difference between revisions of "CHC T00008380001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/E...")
 
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] ==
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== Gene CHC_T00008380001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4374
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
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** NEGATIVE
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* right end position:
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** 6080
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* centisome position:
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** 8.000586   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]]
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** 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 pyridoxamine 5'-phosphate[c] '''+''' 1 oxygen[c] '''+''' 1 H2O[c] '''=>''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ammonium[c] '''+''' 1 hydrogen peroxide[c]
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* Reaction: [[RXN66-579]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[CHC_T00008142001_1]]
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* [[PWY1G-0]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-4661]]
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* [[CHC_T00006254001_1]]
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* [[PWY-6664]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-6372]]
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== Pathways ==
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* [[PWY-2301]]
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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* [[PWY-6580]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4374}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6080}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
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{{#set: centisome position=8.000586    }}
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* UNIPROT:
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{{#set: reaction associated=MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN|RXN66-579}}
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** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
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{{#set: pathway associated=PWY1G-0|PWY-4661|PWY-6664|PWY-6372|PWY-2301|PWY-6580}}
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** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
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** [http://www.uniprot.org/uniprot/P44909 P44909]
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** [http://www.uniprot.org/uniprot/P38075 P38075]
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** [http://www.uniprot.org/uniprot/P74211 P74211]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.4.3.5}}
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{{#set: gene associated=CHC_T00008142001_1|CHC_T00006254001_1}}
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{{#set: in pathway=PWY-7204|PLPSAL-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:33, 9 January 2019

Gene CHC_T00008380001

  • left end position:
    • 4374
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6080
  • centisome position:
    • 8.000586
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008380001&oldid=21904"