Difference between revisions of "RXN-11484"

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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11484 RXN-11484] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** formaldehyde oxidation I
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** [http://enzyme.expasy.org/EC/2.3.1.47 EC-2.3.1.47]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[6PGLUCONOLACT-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[Pimeloyl-ACPs]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[8-AMINO-7-OXONONANOATE]][c]
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* [[GLU6PDEHYDROG-RXN]]
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* With common name(s):
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* [[PGLUCISOM-RXN]]
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** 1 H+[c] '''+''' 1 a pimeloyl-[acp][c] '''+''' 1 L-alanine[c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 8-amino-7-oxononanoate[c]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R10-RXN R10-RXN]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R12-RXN R12-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3341 RXN-3341]
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* Gene: [[CHC_T00004096001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00004094001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7147]], 8-amino-7-oxononanoate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7147 PWY-7147]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formaldehyde oxidation I}}
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{{#set: ec number=EC-2.3.1.47}}
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{{#set: reaction found=3}}
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{{#set: gene associated=CHC_T00004096001_1|CHC_T00004094001_1}}
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{{#set: reaction not found=6}}
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{{#set: in pathway=PWY-6519|PWY-7147}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:33, 9 January 2019

Reaction RXN-11484

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7147, 8-amino-7-oxononanoate biosynthesis II: PWY-7147
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-11484&oldid=21912"