Difference between revisions of "RIBONUCLEOSIDE-DIP-REDUCTII-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA l...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTII-RXN RIBONUCLEOSIDE-DIP-REDUCTII-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** long-chain-fatty-acid-CoA ligase
+
** ribonucleoside-diphosphate reductase beta chain
 +
** ribonucleoside-diphosphate reductase alpha chain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CPD-17637]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17638]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[Reduced-NrdH-Proteins]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[DCDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 7-hydroxylaurate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 7-hydroxylauroyl-CoA[c] '''+''' 1 AMP[c]
+
** 1 a reduced NrdH glutaredoxin-like protein[c] '''+''' 1 CDP[c] '''=>''' 1 H2O[c] '''+''' 1 an oxidized NrdH glutaredoxin-like protein[c] '''+''' 1 dCDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008811001_1]]
+
* Gene: [[CHC_T00008926001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00008811001]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** ORIGINAL_GENOME
+
* Gene: [[CHC_T00008864001]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00009428001_1]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* Gene: [[CHC_T00008926001_1]]
−
* [[CHC_T00009428001]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[CHC_T00008864001_1]]
−
* [[CHC_T00008500001_1]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00008160001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
+
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
−
** '''4''' reactions found over '''18''' reactions in the full pathway
+
** '''12''' reactions found over '''17''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=long-chain-fatty-acid-CoA ligase}}
+
{{#set: common name=ribonucleoside-diphosphate reductase beta chain}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: common name=ribonucleoside-diphosphate reductase alpha chain}}
−
{{#set: gene associated=CHC_T00008811001_1|CHC_T00008811001|CHC_T00009428001_1|CHC_T00009428001|CHC_T00008500001_1|CHC_T00008160001_1}}
+
{{#set: ec number=EC-1.17.4.1}}
−
{{#set: in pathway=PWY-6733}}
+
{{#set: gene associated=CHC_T00008926001|CHC_T00008864001|CHC_T00008926001_1|CHC_T00008864001_1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY0-166}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 17:36, 9 January 2019

Reaction RIBONUCLEOSIDE-DIP-REDUCTII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate reductase beta chain
    • ribonucleoside-diphosphate reductase alpha chain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RIBONUCLEOSIDE-DIP-REDUCTII-RXN&oldid=21985"