Difference between revisions of "6PGLUCONOLACT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene CHC_T00008362001 == * left end position: ** 56157 * transcription direction: ** NEGATIVE * right end position: ** 58934 * centisome position: ** 91.7...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene CHC_T00008362001 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] ==
−
* left end position:
+
* direction:
−
** 56157
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** NEGATIVE
+
** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31]
−
* right end position:
+
−
** 58934
+
−
* centisome position:
+
−
** 91.722336   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* With identifiers:
−
** original_genome
+
** 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-2961]][c]
−
***automated-name-match
+
* With common name(s):
−
* [[RXN0-4961]]
+
** 1 6-phospho D-glucono-1,5-lactone[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate 6-phosphate[c]
−
** original_genome
+
 
−
***automated-name-match
+
== Genes associated with this reaction  ==
−
== Pathways associated ==
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00000675001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
== Pathways  ==
 +
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''15''' reactions found over '''18''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=56157}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12556 12556]
−
{{#set: right end position=58934}}
+
* UNIPROT:
−
{{#set: centisome position=91.722336    }}
+
** [http://www.uniprot.org/uniprot/P63337 P63337]
−
{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN|RXN0-4961}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-3.1.1.31}}
 +
{{#set: gene associated=CHC_T00000675001_1}}
 +
{{#set: in pathway=OXIDATIVEPENT-PWY|RUMP-PWY|GLYCOLYSIS-E-D|P122-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 17:38, 9 January 2019

Reaction 6PGLUCONOLACT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch) I: OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOLYSIS-E-D, superpathway of glycolysis and Entner-Doudoroff: GLYCOLYSIS-E-D
    • 4 reactions found over 6 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 15 reactions found over 18 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=6PGLUCONOLACT-RXN&oldid=22026"