Difference between revisions of "PWY-6892"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTSYN-RXN ACETOOHBUTSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-aceto-2-h...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTSYN-RXN ACETOOHBUTSYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** 2-aceto-2-hydroxy-butyrate synthase
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** thiazole biosynthesis I (facultative anaerobic bacteria)
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** acetolactate synthase small subunit
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* taxonomic range:
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/2.2.1.6 EC-2.2.1.6]
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* Synonym(s):
 
* Synonym(s):
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** (R,Z)-2-(2-carboxy-4-methylthiazol-5(2H)-ylidene)ethyl phosphate biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''7''' reactions in the full pathway
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** 1 [[PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[2-OXOBUTANOATE]][c] '''=>''' 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[DXS-RXN]]
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* With common name(s):
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** 9 associated gene(s):
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** 1 pyruvate[c] '''+''' 1 H+[c] '''+''' 1 2-oxobutanoate[c] '''=>''' 1 (S)-2-aceto-2-hydroxybutanoate[c] '''+''' 1 CO2[c]
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*** [[CHC_T00003402001_1]]
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*** [[CHC_T00008758001]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00001454001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[CHC_T00000865001_1]]
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* [[CHC_T00002409001_1]]
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*** [[CHC_T00009061001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00008758001_1]]
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* [[CHC_980]]
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*** [[CHC_T00003376001_1]]
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** ORIGINAL_GENOME
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*** [[CHC_T00001730001_1]]
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***AUTOMATED-NAME-MATCH
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*** [[CHC_T00000866001_1]]
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* [[CHC_T00008160001_1]]
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** 4 reconstruction source(s) associated:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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*** [[annotation-original_genome]]
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* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
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*** [[orthology-arabidopsis_thaliana]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-ectocarpus_siliculosus]]
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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* [[RXN-14382]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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** 3 associated gene(s):
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* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
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*** [[CHC_T00000657001_1]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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*** [[CHC_T00008053001_1]]
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* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
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*** [[CHC_T00009510001_1]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[orthology]]:
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*** [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]:
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* [[RXN0-308]]
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*** [[galdieria.sulphuraria]]
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** 4 associated gene(s):
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* [[annotation]]:
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*** [[CHC_T00009510001]]
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** [[pathwaytools]]:
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*** [[CHC_T00000657001_1]]
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*** [[original_genome]]
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*** [[CHC_T00009510001_1]]
 +
*** [[CHC_T00008053001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11319 RXN-11319]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9788 RXN-9788]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9789 RXN-9789]
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* [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN2-RXN THIAZOLSYN2-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27654 27654]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6892 PWY-6892]
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* LIGAND-RXN:
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{{#set: common name=thiazole biosynthesis I (facultative anaerobic bacteria)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08648 R08648]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=(R,Z)-2-(2-carboxy-4-methylthiazol-5(2H)-ylidene)ethyl phosphate biosynthesis}}
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** [http://www.uniprot.org/uniprot/Q59950 Q59950]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P42463 P42463]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/Q8XAV3 Q8XAV3]
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{{#set: completion rate=43.0}}
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** [http://www.uniprot.org/uniprot/P27868 P27868]
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** [http://www.uniprot.org/uniprot/P45260 P45260]
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** [http://www.uniprot.org/uniprot/Q57625 Q57625]
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** [http://www.uniprot.org/uniprot/P37251 P37251]
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** [http://www.uniprot.org/uniprot/P45261 P45261]
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** [http://www.uniprot.org/uniprot/O27493 O27493]
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** [http://www.uniprot.org/uniprot/O66759 O66759]
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** [http://www.uniprot.org/uniprot/Q9PHU2 Q9PHU2]
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** [http://www.uniprot.org/uniprot/O05031 O05031]
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** [http://www.uniprot.org/uniprot/Q57725 Q57725]
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** [http://www.uniprot.org/uniprot/Q9PHU1 Q9PHU1]
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** [http://www.uniprot.org/uniprot/Q9JTI1 Q9JTI1]
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** [http://www.uniprot.org/uniprot/Q58077 Q58077]
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** [http://www.uniprot.org/uniprot/O28554 O28554]
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** [http://www.uniprot.org/uniprot/O53554 O53554]
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** [http://www.uniprot.org/uniprot/Q04789 Q04789]
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** [http://www.uniprot.org/uniprot/Q9JRF4 Q9JRF4]
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** [http://www.uniprot.org/uniprot/Q59272 Q59272]
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** [http://www.uniprot.org/uniprot/P27696 P27696]
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** [http://www.uniprot.org/uniprot/Q59498 Q59498]
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** [http://www.uniprot.org/uniprot/Q9RFQ7 Q9RFQ7]
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** [http://www.uniprot.org/uniprot/Q05767 Q05767]
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** [http://www.uniprot.org/uniprot/P40811 P40811]
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** [http://www.uniprot.org/uniprot/P21622 P21622]
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** [http://www.uniprot.org/uniprot/P27818 P27818]
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** [http://www.uniprot.org/uniprot/Q41768 Q41768]
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** [http://www.uniprot.org/uniprot/Q41769 Q41769]
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** [http://www.uniprot.org/uniprot/P69684 P69684]
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** [http://www.uniprot.org/uniprot/P27819 P27819]
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** [http://www.uniprot.org/uniprot/Q9R586 Q9R586]
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** [http://www.uniprot.org/uniprot/Q02137 Q02137]
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** [http://www.uniprot.org/uniprot/Q02140 Q02140]
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** [http://www.uniprot.org/uniprot/P36620 P36620]
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** [http://www.uniprot.org/uniprot/Q42767 Q42767]
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** [http://www.uniprot.org/uniprot/Q42768 Q42768]
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** [http://www.uniprot.org/uniprot/Q49865 Q49865]
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** [http://www.uniprot.org/uniprot/O22547 O22547]
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** [http://www.uniprot.org/uniprot/O49229 O49229]
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** [http://www.uniprot.org/uniprot/O22578 O22578]
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** [http://www.uniprot.org/uniprot/O49210 O49210]
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** [http://www.uniprot.org/uniprot/Q60021 Q60021]
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** [http://www.uniprot.org/uniprot/P07342 P07342]
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** [http://www.uniprot.org/uniprot/P00892 P00892]
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** [http://www.uniprot.org/uniprot/P08142 P08142]
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** [http://www.uniprot.org/uniprot/P0ADF8 P0ADF8]
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** [http://www.uniprot.org/uniprot/P00894 P00894]
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** [http://www.uniprot.org/uniprot/P00893 P00893]
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** [http://www.uniprot.org/uniprot/P17597 P17597]
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** [http://www.uniprot.org/uniprot/P09342 P09342]
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** [http://www.uniprot.org/uniprot/P09114 P09114]
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** [http://www.uniprot.org/uniprot/P14874 P14874]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-aceto-2-hydroxy-butyrate synthase}}
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{{#set: common name=acetolactate synthase small subunit}}
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{{#set: ec number=EC-2.2.1.6}}
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{{#set: gene associated=CHC_T00002409001_1|CHC_980|CHC_T00008160001_1}}
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{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:40, 9 January 2019

Pathway PWY-6892

  • common name:
    • thiazole biosynthesis I (facultative anaerobic bacteria)
  • taxonomic range:
  • Synonym(s):
    • (R,Z)-2-(2-carboxy-4-methylthiazol-5(2H)-ylidene)ethyl phosphate biosynthesis

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6892&oldid=22087"