Difference between revisions of "PREPHENATEDEHYDRAT-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP CDP] == * smiles: ** C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP CDP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDRAT-RXN PREPHENATEDEHYDRAT-RXN] ==
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* smiles:
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* direction:
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** C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K
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** [http://enzyme.expasy.org/EC/4.2.1.51 EC-4.2.1.51]
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* common name:
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** CDP
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* molecular weight:
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** 400.155   
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* Synonym(s):
 
* Synonym(s):
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** cytidine-diphosphate
 
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** cytidine-5'-diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-12198]]
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* With identifiers:
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* [[CDPREDUCT-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[PREPHENATE]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c]
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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* With common name(s):
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* [[CDPKIN-RXN]]
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** 1 H+[c] '''+''' 1 prephenate[c] '''<=>''' 1 H2O[c] '''+''' 1 CO2[c] '''+''' 1 2-oxo-3-phenylpropanoate[c]
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* [[TransportSeed_CDP]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
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* [[RXN-7683]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[TransportSeed_CDP]]
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* Gene: [[CHC_T00003465001_1]]
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* [[RXN-12959]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[RXN-12195]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* [[RXN-11832]]
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== Pathways  ==
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== Reaction(s) of unknown directionality ==
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* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
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* [[ExchangeSeed_CDP]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 63-38-7
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* RHEA:
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* METABOLIGHTS : MTBLC58069
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21648 21648]
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20056867 20056867]
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** [http://www.uniprot.org/uniprot/P27603 P27603]
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* HMDB : HMDB01546
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** [http://www.uniprot.org/uniprot/P43900 P43900]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P21203 P21203]
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** [http://www.genome.jp/dbget-bin/www_bget?C00112 C00112]
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** [http://www.uniprot.org/uniprot/Q58054 Q58054]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9CEU2 Q9CEU2]
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** [http://www.chemspider.com/Chemical-Structure.16740259.html 16740259]
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** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58069 58069]
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** [http://www.uniprot.org/uniprot/Q02286 Q02286]
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* BIGG : cdp
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** [http://www.uniprot.org/uniprot/P43909 P43909]
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{{#set: smiles=C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O}}
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** [http://www.uniprot.org/uniprot/P32452 P32452]
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{{#set: inchi key=InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K}}
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* LIGAND-RXN:
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{{#set: common name=CDP}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01373 R01373]
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{{#set: molecular weight=400.155    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=cytidine-diphosphate|cytidine-5'-diphosphate}}
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{{#set: ec number=EC-4.2.1.51}}
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{{#set: consumed by=RXN-12198|CDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|CDPKIN-RXN|TransportSeed_CDP}}
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{{#set: gene associated=CHC_T00003465001_1}}
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{{#set: produced by=RXN-7683|TransportSeed_CDP|RXN-12959|RXN-12195|RXN-11832}}
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{{#set: in pathway=PWY-7432|PHESYN}}
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{{#set: consumed or produced by=ExchangeSeed_CDP}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 17:41, 9 January 2019

Reaction PREPHENATEDEHYDRAT-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7432, L-phenylalanine biosynthesis III (cytosolic, plants): PWY-7432
    • 3 reactions found over 4 reactions in the full pathway
  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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